Factsheet for Bra036828.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009358.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	Bra009358.1-P	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77983	Canola	cytosol	99.72	99.72
AT3G51240.1	Thale cress	cytosol	93.02	93.02
Bra012862.1-P	Field mustard	cytosol	88.55	90.57
VIT_04s0023g03370.t01	Wine grape	cytosol	84.64	83.47
VIT_18s0001g14310.t01	Wine grape	cytosol	82.68	82.68
Solyc02g083860.2.1	Tomato	cytosol	81.56	80.66
PGSC0003DMT400009175	Potato	cytosol	80.73	80.28
KRH69784	Soybean	cytosol	83.52	79.73
GSMUA_Achr2P02770_001	Banana	cytosol	82.12	79.03
KRH69787	Soybean	nucleus	82.68	78.72
GSMUA_Achr7P16780_001	Banana	cytosol	80.45	77.21
KRH08080	Soybean	cytosol	79.89	76.88
Zm00001d001960_P001	Maize	plastid	76.26	74.59
EES13031	Sorghum	cytosol	75.98	72.73
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	70.11	71.92
TraesCS2B01G521500.1	Wheat	golgi	74.86	70.9
TraesCS2A01G493500.1	Wheat	golgi	74.58	70.82
TraesCS2D01G493400.1	Wheat	golgi, nucleus	74.3	70.37
Bra014831.1-P	Field mustard	cytosol	60.89	67.7
KXG27349	Sorghum	plastid	76.54	63.57
HORVU2Hr1G110130.3	Barley	mitochondrion	73.18	59.01
Os04t0662600-00	Rice	mitochondrion, peroxisome	59.22	52.22
Bra034168.1-P	Field mustard	cytosol	28.21	34.95
Bra037921.1-P	Field mustard	cytosol	34.08	34.76
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	34.08	34.76
Bra029414.1-P	Field mustard	plastid	32.96	34.6
Bra000713.1-P	Field mustard	plastid	32.96	33.71
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	31.56	33.04
Bra017132.1-P	Field mustard	plastid	32.4	32.77
Bra000045.1-P	Field mustard	plastid	31.56	32.01
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.61	31.55
Bra014716.1-P	Field mustard	cytosol	31.28	30.6
Bra005860.1-P	Field mustard	cytosol	31.28	30.11
Bra028752.1-P	Field mustard	cytosol	31.28	30.11
Bra018076.1-P	Field mustard	cytosol	24.86	29.18
Bra013652.1-P	Field mustard	cytosol	29.05	29.05
Bra014500.1-P	Field mustard	cytosol	28.49	28.57
Bra019350.1-P	Field mustard	cytosol	28.21	28.29
Bra004867.1-P	Field mustard	cytosol	28.21	28.13
Bra038647.1-P	Field mustard	cytosol	24.02	28.01
Bra038648.1-P	Field mustard	cytosol	23.18	27.95
Bra009771.1-P	Field mustard	mitochondrion	32.4	27.75
Bra034861.1-P	Field mustard	cytosol	31.28	27.65
Bra017227.1-P	Field mustard	cytosol	28.21	27.52
Bra029211.1-P	Field mustard	cytosol	22.91	26.45
Bra037747.1-P	Field mustard	cytosol	23.18	26.43
Os08t0480200-01	Rice	cytosol	24.3	25.82
Bra028696.1-P	Field mustard	cytosol	23.46	23.27
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	16.76	21.74
Bra029212.1-P	Field mustard	cytosol	23.46	19.91
Bra007204.1-P	Field mustard	cytosol	31.56	18.2
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.56	0.32

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	EnsemblPlantsGene:Bra036828	EnsemblPlants:Bra036828.1	EnsemblPlants:Bra036828.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4F6W8
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137
SUPFAM:SSF51197	UniParc:UPI000165273A	:	:	:	:

Description

AT3G51240 (E=5e-197) F3H, TT6, F3'H | F3H (FLAVANONE 3-HYDROXYLASE); naringenin 3-dioxygenase

Coordinates

chrA09:+:25568110..25569623

Molecular Weight (calculated)

40106.8 Da

IEP (calculated)

5.346

GRAVY (calculated)

-0.438

Length

358 amino acids

Sequence
(BLAST)

001: MAPGTLTELA GETKLNSKFV RDEDERPKVA YNEFSTEIPV ISLAGIDDVG GKRGEICRQI VEACENWGVF QVVDHGVDTS LVADMTRLAR DFFALPPEEK
101: LKFDMSGGKK GGFIVSSHLQ GESVQDWREI VTYFSYPVRN RDYSRWPTKP EGWVKVTEEY SERLMGLACK LLEVLSEAMG LEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GKTWITVQPV EGAVVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPEATV
301: YPLKVREGEK PILEEPITFA EMYRRKMSRD IELARLKKLA KEEHDHKEAA KPLDQIIA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.