CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00073
EES07584

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	EES00073	AT5G08640.1	18467451
AT3G51240.1	EES07584	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13031	Sorghum	cytosol	82.37	94.92
Zm00001d001960_P001	Maize	plastid	79.12	93.17
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	66.13	81.66
TraesCS2B01G521500.1	Wheat	golgi	71.0	80.95
TraesCS2A01G493500.1	Wheat	golgi	70.77	80.9
TraesCS2D01G493400.1	Wheat	golgi, nucleus	70.3	80.16
VIT_18s0001g14310.t01	Wine grape	cytosol	64.04	77.09
CDX77983	Canola	cytosol	63.81	76.82
AT3G51240.1	Thale cress	cytosol	63.57	76.54
Bra036828.1-P	Field mustard	cytosol	63.57	76.54
VIT_04s0023g03370.t01	Wine grape	cytosol	64.04	76.03
CDX73739	Canola	cytosol	63.11	75.98
PGSC0003DMT400009175	Potato	cytosol	62.88	75.28
CDX90656	Canola	cytosol	61.02	75.14
GSMUA_Achr2P02770_001	Banana	cytosol	64.73	75.0
Solyc02g083860.2.1	Tomato	cytosol	62.88	74.86
GSMUA_Achr7P16780_001	Banana	cytosol	64.27	74.26
CDY29008	Canola	cytosol	59.86	73.71
Bra012862.1-P	Field mustard	cytosol	59.63	73.43
KRH69784	Soybean	cytosol	62.18	71.47
HORVU2Hr1G110130.3	Barley	mitochondrion	72.85	70.72
KRH69787	Soybean	nucleus	61.25	70.21
KRH08080	Soybean	cytosol	60.56	70.16
KRH76658	Soybean	cytosol	58.7	69.32
CDX76765	Canola	cytosol	32.25	58.4
Os04t0662600-00	Rice	mitochondrion, peroxisome	53.6	56.9
Bra014831.1-P	Field mustard	cytosol	42.23	56.52
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	37.82	55.63
EER92960	Sorghum	cytosol	31.09	39.88
EER95911	Sorghum	cytosol	28.07	36.12
EER94585	Sorghum	cytosol	27.15	34.82
EES12710	Sorghum	cytosol, peroxisome, plastid	27.84	34.19
EER87904	Sorghum	plastid	27.15	33.91
KXG26978	Sorghum	cytosol	26.68	33.53
EES00073	Sorghum	cytosol	23.67	33.12
EES07584	Sorghum	cytosol	25.29	32.83
EES01705	Sorghum	cytosol	29.23	32.47
KXG23558	Sorghum	cytosol	25.75	32.46
EES18946	Sorghum	cytosol	27.15	31.97
OQU82532	Sorghum	cytosol	22.04	29.59
EES15500	Sorghum	cytosol	18.33	29.26
EER92419	Sorghum	cytosol	25.52	28.72
EER96378	Sorghum	cytosol	26.22	28.68
EES08336	Sorghum	cytosol	25.75	28.03
EES06032	Sorghum	cytosol	22.74	27.92
EES15170	Sorghum	cytosol	26.68	27.91
KXG23555	Sorghum	cytosol	21.35	27.3
EES16044	Sorghum	cytosol	21.35	27.3
EES16047	Sorghum	cytosol	21.58	27.27
Os08t0480200-01	Rice	cytosol	21.11	27.0
KXG27374	Sorghum	plastid	20.42	26.43
EES04312	Sorghum	cytosol	23.2	25.06
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	20.42	23.1
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.23	0.16

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	UniProt:A0A1B6PNU6	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KXG27349	ProteinID:KXG27349	ProteinID:KXG27349.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137
EnsemblPlantsGene:SORBI_3006G254000	SUPFAM:SSF51197	UniParc:UPI00081AD3E1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:59160397..59162347

Molecular Weight (calculated)

47375.5 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.300

Length

431 amino acids

Sequence
(BLAST)

001: MPLYNANAAQ AVVNSSSTKR QRVPEHQHNL SGGGAYVGDR RRTQTQTQSR HMAPVSISAV PFLPTAAFGE STLRASFVRE EDERPKVPHD RFSDEVPVVS
101: LEGIDGGGAR RAEIRARVAA ACEDWGIFQV VDHGVDAALV AEMARLARDF FALPAEDKLR FDMSGGKKGG FIVSSHLQGE VVQDWREIVT YFSYPVKSRD
201: FSRWPDKPAA WRAVVERYSE QLMGLACKLL GVLSEAMGLE TDALAKACVD MDQKVVVNFY PKCPQPDLTL GLKRHTDPGT ITLLLQDLVG GLQATRDGGR
301: TWITVQPVEG AFVVNLGDHG HLLSNGRFKN ADHQAVVNSE CSRLSIATFQ NPAPDATVYP LAVREGEAPI LDDPITFAEM YRRKMARDIE LAKLKKQAKA
401: EKQQKIAKEF AVPTAKEFAV PNAKPLDDIL A

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.