Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0581000-01 | Rice | cytosol | 82.51 | 83.24 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 81.05 | 81.76 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 81.05 | 81.76 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 80.47 | 81.18 |
| HORVU0Hr1G005300.1 | Barley | cytosol | 80.17 | 80.88 |
| GSMUA_Achr8P12320_001 | Banana | cytosol, nucleus, peroxisome | 71.14 | 71.55 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 73.18 | 71.1 |
| EER92960 | Sorghum | cytosol | 67.64 | 69.05 |
| EER94585 | Sorghum | cytosol | 67.35 | 68.75 |
| KRH53636 | Soybean | cytosol | 65.89 | 66.86 |
| VIT_13s0047g00210.t01 | Wine grape | cytosol | 65.6 | 66.77 |
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 65.6 | 66.57 |
| KRH64291 | Soybean | cytosol | 64.43 | 65.38 |
| Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 63.56 | 64.69 |
| PGSC0003DMT400001570 | Potato | cytosol | 63.56 | 64.69 |
| CDY05445 | Canola | plastid | 62.68 | 63.05 |
| CDY05412 | Canola | mitochondrion | 62.68 | 63.05 |
| Bra029414.1-P | Field mustard | plastid | 62.68 | 63.05 |
| AT5G24530.1 | Thale cress | mitochondrion | 62.39 | 62.76 |
| CDX88109 | Canola | mitochondrion | 60.93 | 61.29 |
| CDX80450 | Canola | mitochondrion | 60.35 | 60.7 |
| PGSC0003DMT400069218 | Potato | cytosol | 60.35 | 60.53 |
| Solyc06g073080.2.1 | Tomato | plastid | 55.98 | 60.0 |
| EES12710 | Sorghum | cytosol, peroxisome, plastid | 53.64 | 52.42 |
| Bra009771.1-P | Field mustard | mitochondrion | 58.89 | 48.33 |
| EER95911 | Sorghum | cytosol | 37.61 | 38.51 |
| EES06032 | Sorghum | cytosol | 36.73 | 35.9 |
| EES16047 | Sorghum | cytosol | 35.28 | 35.48 |
| KXG23555 | Sorghum | cytosol | 34.69 | 35.31 |
| EES01705 | Sorghum | cytosol | 39.65 | 35.05 |
| EES16044 | Sorghum | cytosol | 34.4 | 35.01 |
| KXG23558 | Sorghum | cytosol | 34.69 | 34.8 |
| EES18946 | Sorghum | cytosol | 37.03 | 34.7 |
| EER87904 | Sorghum | plastid | 33.53 | 33.33 |
| EES00073 | Sorghum | cytosol | 28.86 | 32.14 |
| EER92419 | Sorghum | cytosol | 35.28 | 31.59 |
| EES07584 | Sorghum | cytosol | 30.03 | 31.02 |
| EER96378 | Sorghum | cytosol | 35.57 | 30.96 |
| EES15500 | Sorghum | cytosol | 24.2 | 30.74 |
| EES08336 | Sorghum | cytosol | 35.28 | 30.56 |
| OQU82532 | Sorghum | cytosol | 28.57 | 30.53 |
| EES13031 | Sorghum | cytosol | 33.24 | 30.48 |
| EES15170 | Sorghum | cytosol | 36.15 | 30.1 |
| KXG27374 | Sorghum | plastid | 28.86 | 29.73 |
| OQU80974 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 30.61 | 27.56 |
| KXG27349 | Sorghum | plastid | 33.53 | 26.68 |
| EES04312 | Sorghum | cytosol | 27.7 | 23.81 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.3.1 | UniProt:A0A1B6PMR2 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EnsemblPlants:KXG26978 | ProteinID:KXG26978 | ProteinID:KXG26978.1 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF389 |
| EnsemblPlantsGene:SORBI_3006G190000 | SUPFAM:SSF51197 | UniParc:UPI0003C738DE | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:54415461..54422688
Molecular Weight (calculated)
39236.9 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.340
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQLLSTVE RREVLPECYI RPEFDRPRLA EVTTDSDVPL IDLASPDKQR VIGQIGLACR TYGFFQVINH GIEEELLEKM MAVGLEFFRL PPEEKEKLYS
101: DEPFKKIRLS TSFNVRKETV RNWRDYLRLH CHPLEEFLPE WPSNPESFKE VVSAYCREVR LLGLRLLGMI SLSLGLEEDY IEKALGEQEQ HMAVNYYPQC
201: PEPDLTYGLP KHTDPNALTV LLQDPNVAGL QVLKGGDQWI AVSPRRNAFV INLGDQLQAL SNGAYKSVWH RAVVNAAQER MSVASFLCPC NSAVISPAAA
301: LVGEGDAPVY RSYTYEEYYK KFWSRSLDQE HCLELFRSTQ QLQ
101: DEPFKKIRLS TSFNVRKETV RNWRDYLRLH CHPLEEFLPE WPSNPESFKE VVSAYCREVR LLGLRLLGMI SLSLGLEEDY IEKALGEQEQ HMAVNYYPQC
201: PEPDLTYGLP KHTDPNALTV LLQDPNVAGL QVLKGGDQWI AVSPRRNAFV INLGDQLQAL SNGAYKSVWH RAVVNAAQER MSVASFLCPC NSAVISPAAA
301: LVGEGDAPVY RSYTYEEYYK KFWSRSLDQE HCLELFRSTQ QLQ
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.