CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029414.1-P	Field mustard	plastid	100.0	100.0
CDY05412	Canola	mitochondrion	97.07	97.07
AT5G24530.1	Thale cress	mitochondrion	88.86	88.86
CDX88109	Canola	mitochondrion	87.39	87.39
CDX80450	Canola	mitochondrion	86.8	86.8
KRH64291	Soybean	cytosol	69.79	70.41
KRH53636	Soybean	cytosol	69.5	70.12
VIT_13s0047g00210.t01	Wine grape	cytosol	67.16	67.95
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	66.86	67.46
PGSC0003DMT400069218	Potato	cytosol	66.57	66.37
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	65.1	65.88
Solyc06g073080.2.1	Tomato	plastid	61.0	65.0
PGSC0003DMT400001570	Potato	cytosol	63.93	64.69
TraesCS4D01G341800.1	Wheat	cytosol	62.46	63.39
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	62.76	63.13
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	62.17	62.91
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	62.17	62.91
Os03t0122300-01	Rice	cytosol	63.05	62.87
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	61.88	62.8
KXG26978	Sorghum	cytosol	63.05	62.68
Os04t0581000-01	Rice	cytosol	62.46	62.65
EER92960	Sorghum	cytosol	61.58	62.5
TraesCS4B01G346900.1	Wheat	cytosol	61.29	62.2
EER94585	Sorghum	cytosol	61.29	62.2
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	61.58	61.58
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	60.7	61.42
TraesCS2A01G395000.1	Wheat	cytosol	60.41	60.59
GSMUA_Achr5P12830_001	Banana	cytosol	60.12	60.47
Zm00001d029744_P001	Maize	cytosol	59.53	60.42
HORVU0Hr1G005300.1	Barley	cytosol	59.82	60.0
TraesCS2D01G392800.1	Wheat	cytosol	59.82	60.0
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	61.88	59.77
GSMUA_Achr1P00770_001	Banana	cytosol	58.94	59.64
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	58.94	59.12
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	61.0	56.37
TraesCS5A01G515600.2	Wheat	cytosol	62.17	55.21
CDX90761	Canola	plastid	52.49	51.14
CDX86858	Canola	cytosol	49.27	49.56
CDX99548	Canola	cytosol	49.27	49.56
CDY05103	Canola	cytosol, nucleus, peroxisome	49.85	48.43
CDX99550	Canola	cytosol	48.09	48.09
CDX99549	Canola	vacuole	29.91	47.89
CDX90759	Canola	cytosol	39.88	45.03
CDY56988	Canola	peroxisome	38.42	36.69
CDY30486	Canola	cytosol, nucleus, peroxisome	38.12	36.52
CDY23457	Canola	cytosol, nucleus, peroxisome	37.83	36.24
CDY42687	Canola	peroxisome	37.54	35.75
CDX74687	Canola	cytosol	36.95	35.1
CDY32234	Canola	cytosol, nucleus, peroxisome	34.6	34.5
CDX90656	Canola	cytosol	35.19	34.29
CDY34450	Canola	cytosol	34.31	34.21
CDX73739	Canola	cytosol	35.48	33.8
CDY29008	Canola	cytosol	34.31	33.43
CDX77983	Canola	cytosol	34.9	33.24
CDX75020	Canola	cytosol	35.78	33.15
CDY39860	Canola	cytosol	29.33	32.36
CDY02966	Canola	cytosol	34.31	32.14
CDY04960	Canola	cytosol	34.9	31.99
CDX76068	Canola	cytosol	34.31	31.97
HORVU4Hr1G089330.2	Barley	plastid	40.76	31.95
CDY65238	Canola	cytosol, nucleus, peroxisome	33.72	31.86
CDY39565	Canola	cytosol	28.45	31.8
CDX70044	Canola	cytosol, nucleus, peroxisome	33.43	31.58
CDY48154	Canola	cytosol	28.15	31.48
CDY11329	Canola	cytosol	34.31	31.45
CDY68873	Canola	plastid	32.55	31.44
CDX93319	Canola	plastid	32.55	31.44
CDY18399	Canola	plastid	32.55	31.36
CDY31361	Canola	cytosol	28.45	31.29
CDX80966	Canola	cytosol	34.02	31.18
CDY07746	Canola	plastid	32.26	31.16
CDY14105	Canola	cytosol, nucleus, peroxisome	34.9	30.99
CDY14476	Canola	plastid	31.67	30.59
CDY69013	Canola	cytosol	27.27	30.29
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	29.33	29.76
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	29.33	29.76
CDY41520	Canola	cytosol	21.41	29.55
CDY10816	Canola	cytosol	30.79	29.33
CDY41522	Canola	cytosol	25.51	29.29
CDX94133	Canola	cytosol	30.5	29.05
CDY41286	Canola	cytosol	30.5	29.05
CDX81188	Canola	cytosol	26.69	28.44
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	24.34	28.33
CDX76765	Canola	cytosol	19.65	28.15
CDX97750	Canola	cytosol	18.18	28.05
CDY01001	Canola	cytosol	33.14	27.9
CDY08545	Canola	cytosol	32.26	27.16
CDX98776	Canola	cytosol	30.21	26.21
CDY31363	Canola	cytosol	28.74	23.22
CDX72185	Canola	nucleus	34.31	23.21
CDY27251	Canola	nucleus	33.72	18.52
CDY41521	Canola	cytosol, mitochondrion	0.59	9.52

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	GO:A0A078ETQ6	EnsemblPlants:CDY05445	ProteinID:CDY05445	ProteinID:CDY05445.1
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00120353001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF371	SUPFAM:SSF51197
UniParc:UPI000254721C	SEG:seg	:	:	:	:

Description

BnaA02g32460D

Coordinates

chrLK031962:+:146453..154629

Molecular Weight (calculated)

39258.6 Da

IEP (calculated)

5.278

GRAVY (calculated)

-0.455

Length

341 amino acids

Sequence
(BLAST)

001: MAAKLISTGF RLTTLPENYV RPLSDRPRLS EVSQLEDFPL IDISATDRPR LVQQIHQACA RFGFFQVINH GVSKATIDEM VTVAHEFFGM PMDEKMKLYS
101: DDPTKTPRLS TSFNVKEEEV NNWRDYLRLH CYPIDKYVHE WPSNPPSFKE VVSKYSREIR ELGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDATVCGL QILIDGHWFA VNPRPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SIASFMCPDN GAVISPAKPL
301: WEAKEEEAKP VYRDYTYAEY YKKFWSRNLD QEHCLENFLN D

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.