Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G341800.1 | Wheat | cytosol | 85.94 | 98.21 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 85.42 | 97.62 |
| HORVU4Hr1G084810.2 | Barley | cytosol, peroxisome, plastid | 82.55 | 94.35 |
| Os03t0122300-01 | Rice | cytosol | 72.14 | 80.99 |
| EER92960 | Sorghum | cytosol | 69.79 | 79.76 |
| GSMUA_Achr1P03620_001 | Banana | cytosol, nucleus, peroxisome | 63.8 | 72.7 |
| GSMUA_Achr2P10240_001 | Banana | cytosol, nucleus, peroxisome | 63.02 | 71.39 |
| GSMUA_Achr4P30130_001 | Banana | cytosol, nucleus, peroxisome | 62.24 | 70.92 |
| Zm00001d027423_P002 | Maize | cytosol, nucleus, peroxisome | 67.97 | 70.73 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 61.46 | 69.41 |
| GSMUA_Achr5P12830_001 | Banana | cytosol | 60.68 | 68.73 |
| GSMUA_Achr5P10230_001 | Banana | cytosol, nucleus, peroxisome | 59.64 | 67.95 |
| GSMUA_Achr1P00770_001 | Banana | cytosol | 58.07 | 66.17 |
| PGSC0003DMT400001570 | Potato | cytosol | 57.81 | 65.88 |
| KRH53636 | Soybean | cytosol | 57.03 | 64.79 |
| KRH64291 | Soybean | cytosol | 57.03 | 64.79 |
| VIT_13s0047g00210.t01 | Wine grape | cytosol | 56.77 | 64.69 |
| Solyc03g080190.2.1 | Tomato | cytosol, peroxisome, plastid | 56.25 | 64.09 |
| PGSC0003DMT400069218 | Potato | cytosol | 57.03 | 64.04 |
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 55.73 | 63.31 |
| CDY05445 | Canola | plastid | 55.21 | 62.17 |
| Bra029414.1-P | Field mustard | plastid | 55.21 | 62.17 |
| Solyc06g073080.2.1 | Tomato | plastid | 51.56 | 61.88 |
| AT5G24530.1 | Thale cress | mitochondrion | 54.43 | 61.29 |
| CDX88109 | Canola | mitochondrion | 54.17 | 61.0 |
| CDY05412 | Canola | mitochondrion | 53.91 | 60.7 |
| CDX80450 | Canola | mitochondrion | 53.12 | 59.82 |
| TraesCS2A01G394900.1 | Wheat | plastid | 46.61 | 51.29 |
| Bra009771.1-P | Field mustard | mitochondrion | 52.08 | 47.85 |
| TraesCS7A01G159200.1 | Wheat | plastid | 32.03 | 36.94 |
| TraesCS6A01G033300.1 | Wheat | plastid | 31.77 | 35.26 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 33.33 | 34.59 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 24.74 | 34.42 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 32.03 | 34.36 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 29.17 | 34.36 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 30.21 | 34.12 |
| TraesCS6A01G331400.1 | Wheat | plastid | 29.43 | 33.83 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 30.73 | 33.71 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 24.22 | 33.7 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 29.43 | 33.63 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 30.21 | 33.53 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 29.69 | 32.95 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 28.12 | 32.93 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 26.82 | 32.91 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 31.51 | 32.88 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 30.99 | 32.51 |
| TraesCS6A01G288300.1 | Wheat | plastid | 28.65 | 32.35 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 29.69 | 31.93 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 31.51 | 31.93 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 20.57 | 31.1 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 26.3 | 30.98 |
| TraesCS2A01G493500.1 | Wheat | golgi | 29.95 | 30.5 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.03 | 30.15 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 23.18 | 28.71 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 26.82 | 28.69 |
| TraesCS6A01G030500.1 | Wheat | plastid | 21.09 | 27.36 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 26.82 | 26.21 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 28.12 | 24.66 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G515600.2 | EnsemblPlantsGene:TraesCS5A01G515600 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF389 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.3.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:679134425..679137827
Molecular Weight (calculated)
43858.6 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.368
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQLISTAV HHTLPESYVR SEAERPRLDE VVPDADIPVV DLANPDRAAV VAQIGAACSS HGFFQVSPSQ FPFPPAYKPG RRSVFPFGKR EWGRSAFAHR
101: ARVCRVWSLT DRQVLNHGLP LEVMLAAMAV AHEFFRLSPE EKAKLYSDDP AKKMRLSTSF NVRKETVHNW RDYLRLHCHP LEQFVPEWPA NPPPFRDVMS
201: TYCKEVRQLG FRLYAMISAS LGLEQDYIKK VLGEQEQHMA VNFYPKCPSP ELTYGLPAHT DPNALTILMM DEQVAGLQVL KEGRWIAVNP RPNALVINLG
301: DQLQALSNGR YKSVWHRAVV NSDRPRMSIA SFLCPCNCVK LGPAEKLIGE KSPAVYRNYT YDEYYKKFWS RNLDQEHCLE LFRT
101: ARVCRVWSLT DRQVLNHGLP LEVMLAAMAV AHEFFRLSPE EKAKLYSDDP AKKMRLSTSF NVRKETVHNW RDYLRLHCHP LEQFVPEWPA NPPPFRDVMS
201: TYCKEVRQLG FRLYAMISAS LGLEQDYIKK VLGEQEQHMA VNFYPKCPSP ELTYGLPAHT DPNALTILMM DEQVAGLQVL KEGRWIAVNP RPNALVINLG
301: DQLQALSNGR YKSVWHRAVV NSDRPRMSIA SFLCPCNCVK LGPAEKLIGE KSPAVYRNYT YDEYYKKFWS RNLDQEHCLE LFRT
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.