Factsheet for TraesCS4A01G311000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G003300.1	Wheat	plastid	95.41	91.21
TraesCS4D01G002800.1	Wheat	cytosol, plastid	94.32	89.26
HORVU4Hr1G000050.3	Barley	plastid	88.92	81.44
EER96378	Sorghum	cytosol	68.65	64.47
Os09t0570800-01	Rice	cytosol	61.35	60.7
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.51	57.6
GSMUA_Achr9P23620_001	Banana	cytosol	53.24	52.12
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	50.81	51.37
PGSC0003DMT400070302	Potato	cytosol	50.81	50.95
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	52.16	50.66
VIT_08s0007g04540.t01	Wine grape	cytosol	50.81	49.87
Solyc11g007890.1.1	Tomato	cytosol	50.27	49.73
KRH67790	Soybean	cytosol	49.19	49.73
Bra017227.1-P	Field mustard	cytosol	48.92	49.32
CDX75020	Canola	cytosol	48.92	49.18
KRG96078	Soybean	cytosol	48.92	48.27
KRH32602	Soybean	cytosol	49.73	48.17
VIT_00s0250g00090.t01	Wine grape	cytosol	48.65	48.13
KRH19976	Soybean	cytosol	49.46	48.03
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	42.16	48.0
Solyc09g008560.2.1	Tomato	cytosol	48.92	47.88
PGSC0003DMT400009900	Potato	cytosol	48.92	47.38
KRH07794	Soybean	cytosol	39.19	46.03
TraesCS2A01G487100.1	Wheat	cytosol	29.46	39.49
TraesCS2A01G538600.1	Wheat	cytosol	33.51	37.8
TraesCS2A01G395000.1	Wheat	cytosol	33.78	36.76
TraesCS2A01G538700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	31.62	35.89
TraesCS2A01G394900.1	Wheat	plastid	33.78	35.82
TraesCS5A01G048400.1	Wheat	cytosol	31.35	34.12
TraesCS5A01G513700.1	Wheat	cytosol, plastid	30.81	33.93
TraesCS6A01G331400.1	Wheat	plastid	30.27	33.53
TraesCS5A01G515600.2	Wheat	cytosol	34.59	33.33
TraesCS7A01G159200.1	Wheat	plastid	29.73	33.03
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	31.89	32.96
TraesCS3A01G445000.1	Wheat	cytosol	31.08	32.86
TraesCS6A01G055700.1	Wheat	cytosol	30.27	32.37
TraesCS5A01G154900.1	Wheat	cytosol, nucleus, peroxisome	31.89	32.24
TraesCS6A01G288300.1	Wheat	plastid	29.46	32.06
TraesCS4A01G109200.1	Wheat	cytosol	31.62	31.79
TraesCS3A01G351400.2	Wheat	cytosol	32.43	31.66
TraesCS7A01G037700.1	Wheat	cytosol	23.51	31.52
TraesCS1A01G008400.1	Wheat	mitochondrion	27.57	31.29
TraesCS6A01G033300.1	Wheat	plastid	29.19	31.21
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	28.38	30.35
TraesCS6A01G288400.1	Wheat	cytosol	28.92	29.97
TraesCS6A01G031500.1	Wheat	cytosol	19.73	28.74
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	27.3	28.13
TraesCS7A01G026100.1	Wheat	cytosol	23.78	28.11
TraesCS2A01G493500.1	Wheat	golgi	27.57	27.06
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	22.43	26.77
TraesCS6A01G030500.1	Wheat	plastid	21.08	26.35
TraesCS6A01G041800.1	Wheat	cytosol	25.68	24.17
TraesCS6A01G001500.1	Wheat	cytosol	25.41	21.46

Protein Annotations

EnsemblPlants:TraesCS4A01G311000.1	EnsemblPlantsGene:TraesCS4A01G311000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF207	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.3.3	:	:

Description

No Description!

Coordinates

chr4A:-:603405890..603409736

Molecular Weight (calculated)

40787.8 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.246

Length

370 amino acids

Sequence
(BLAST)

001: MAESSSSHAH HPQQQPTVAT CKASEEPNKG VRHLCERGVT ALPPRYVLPP SDRPAPAAPR GIPVIDMARL RSTAPSERAA ELARLDAACR DLGFFQAVNH
101: GAGDKARAML DVAARFFALP FEERARHMSP DIRAPVRYGT SFNQLNDGVL CWRDFLKLLC NPARLDDVVP SWPNNPSDLR EVMSAYARAN QGLFRELMEA
201: ALEAMGITGE GVLEELDCGT QMMMVNCFPA CPEPELTLGM PPHSDYGFLT LLLQDQVNGL EVCQGDDDWL LVDPLPGALI INVGDHLEIF SNGRYKSVLH
301: RVRVNSTQLR ISVASLHSLP PERVIGPAPE LLADGTPRRY MDTDLTTFLD YLASAEGKHK TFLQSRRITT

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.