Factsheet for VIT_08s0007g04540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0250g00090.t01	Wine grape	cytosol	68.17	68.72
KRH32602	Soybean	cytosol	66.84	65.97
KRH19976	Soybean	cytosol	65.25	64.57
KRH67790	Soybean	cytosol	62.6	64.48
KRG96078	Soybean	cytosol	63.66	64.0
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	62.07	63.93
CDX75020	Canola	cytosol	61.54	63.04
PGSC0003DMT400009900	Potato	cytosol	63.66	62.83
Bra017227.1-P	Field mustard	cytosol	61.01	62.67
Solyc09g008560.2.1	Tomato	cytosol	62.6	62.43
KRH07794	Soybean	cytosol	51.19	61.27
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	60.48	59.84
GSMUA_Achr9P23620_001	Banana	cytosol	55.44	55.29
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	46.68	54.15
TraesCS4A01G311000.1	Wheat	cytosol	49.87	50.81
TraesCS7D01G279500.1	Wheat	cytosol	51.46	50.79
TraesCS4B01G003300.1	Wheat	plastid	49.6	48.32
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.25	48.28
EER96378	Sorghum	cytosol	50.4	48.22
TraesCS4D01G002800.1	Wheat	cytosol, plastid	49.87	48.08
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.46	48.02
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	50.93	48.0
Zm00001d049926_P001	Maize	cytosol	51.19	47.89
EES15170	Sorghum	cytosol	51.19	46.84
Os09t0570800-01	Rice	cytosol	46.15	46.52
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	49.6	46.06
VIT_16s0013g00730.t01	Wine grape	cytosol	24.4	46.0
HORVU4Hr1G000050.3	Barley	plastid	49.07	45.79
EES08336	Sorghum	cytosol	48.01	45.71
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.25	44.77
VIT_13s0047g00210.t01	Wine grape	cytosol	37.14	41.54
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	36.6	40.83
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	37.93	40.28
VIT_15s0048g02430.t01	Wine grape	cytosol	36.07	39.53
VIT_02s0025g02960.t01	Wine grape	cytosol	36.34	39.37
Zm00001d052999_P001	Maize	cytosol	45.89	39.05
VIT_02s0025g02970.t01	Wine grape	cytosol	35.81	38.79
VIT_18s0001g06690.t01	Wine grape	cytosol	34.22	38.39
VIT_03s0017g00620.t01	Wine grape	cytosol	34.22	36.65
VIT_18s0001g03430.t01	Wine grape	cytosol	30.77	34.94
VIT_08s0105g00380.t01	Wine grape	cytosol	33.16	34.92
VIT_03s0017g00710.t01	Wine grape	plastid	32.1	34.87
VIT_18s0001g03470.t01	Wine grape	cytosol	29.44	34.47
VIT_13s0067g01020.t01	Wine grape	cytosol	32.63	34.26
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	30.24	33.43
VIT_03s0017g02350.t01	Wine grape	cytosol	30.5	32.39
VIT_18s0001g03490.t01	Wine grape	cytosol	28.38	31.94
VIT_18s0001g14310.t01	Wine grape	cytosol	30.24	31.84
VIT_04s0023g03370.t01	Wine grape	cytosol	30.5	31.68
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	28.12	29.86
VIT_03s0017g00830.t01	Wine grape	plastid	33.95	23.62
VIT_18s0001g03510.t01	Wine grape	cytosol	28.38	15.74

Protein Annotations

EntrezGene:100265936	wikigene:100265936	MapMan:11.6.3.3	Gene3D:2.60.120.330	ProteinID:CCB55365	ProteinID:CCB55365.1
InterPro:DIOX_N	UniProt:F6HKE3	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100265936	wikigene:LOC100265936	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF152	SUPFAM:SSF51197
UniParc:UPI00021098F2	ArrayExpress:VIT_08s0007g04540	EnsemblPlantsGene:VIT_08s0007g04540	EnsemblPlants:VIT_08s0007g04540.t01	RefSeq:XP_002265059	RefSeq:XP_002265059.1
RefSeq:XP_010654004.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:18457878..18461377

Molecular Weight (calculated)

42489.9 Da

IEP (calculated)

5.814

GRAVY (calculated)

-0.314

Length

377 amino acids

Sequence
(BLAST)

001: MSPAMGITTE SKQENDPLDT HYQNGVKHLC ENGISKVPNK YILPVSERPS SDNGVPNAAE LSLNLPVIDF AELQGSNRSQ VLKSIANACE EYGFFQLVNH
101: GIPSDIISSM IDVSQRFFDL PMEERAKYMS ADMCSPVRYG TSFNQTKDGV FCWRDFLKLM CHPLSDVLPH WPSSPVDFRK LAVTYSKETK YLFLTLMEAI
201: LESLGLCGDT KKKTGEEDDD ILEKFQDGSQ LMVVNCYPPC PEPELTLGMP PHSDYGFLTL LLQDDIQGLQ IQFKGKWLTV EPLANSFVIN IGDHLEIFSN
301: GKYKSVLHRV VVNSTKPRIS VASLHSLPFK CMVKPAPQLI SQENPRHYKD TDFASFLDYI SSCEPKRKNF LESRKLS

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.