Factsheet for VIT_03s0017g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g00710.t01	Wine grape	plastid	71.59	72.62
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	55.68	55.52
Solyc08g006770.2.1	Tomato	plastid	55.11	55.27
Solyc01g105660.2.1	Tomato	cytosol, plastid	54.83	54.06
VIT_18s0001g06690.t01	Wine grape	cytosol	51.42	53.87
PGSC0003DMT400083733	Potato	cytosol	54.83	53.61
VIT_03s0017g00830.t01	Wine grape	plastid	73.86	47.97
VIT_16s0013g00730.t01	Wine grape	cytosol	22.16	39.0
VIT_15s0048g02430.t01	Wine grape	cytosol	35.8	36.63
VIT_02s0025g02970.t01	Wine grape	cytosol	35.51	35.92
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	34.09	35.5
VIT_13s0047g00210.t01	Wine grape	cytosol	33.52	35.01
VIT_02s0025g02960.t01	Wine grape	cytosol	34.09	34.48
VIT_00s0250g00090.t01	Wine grape	cytosol	36.36	34.22
VIT_08s0007g04540.t01	Wine grape	cytosol	36.65	34.22
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	34.09	33.8
VIT_13s0067g01020.t01	Wine grape	cytosol	32.67	32.03
VIT_18s0001g03470.t01	Wine grape	cytosol	28.12	30.75
VIT_18s0001g03430.t01	Wine grape	cytosol	28.98	30.72
VIT_03s0017g02350.t01	Wine grape	cytosol	30.68	30.42
VIT_08s0105g00380.t01	Wine grape	cytosol	30.68	30.17
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	28.98	29.91
VIT_18s0001g03490.t01	Wine grape	cytosol	27.56	28.96
VIT_18s0001g14310.t01	Wine grape	cytosol	29.26	28.77
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	28.41	28.17
VIT_04s0023g03370.t01	Wine grape	cytosol	28.98	28.1
VIT_18s0001g03510.t01	Wine grape	cytosol	29.83	15.44

Protein Annotations

EntrezGene:100253700	wikigene:100253700	Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI34024	ProteinID:CBI34024.3
UniProt:D7TU51	InterPro:DIOX_N	EMBL:FN596248	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100253700	wikigene:LOC100253700	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369	SUPFAM:SSF51197
TIGR:TC53540	UniParc:UPI00015CBE5F	ArrayExpress:VIT_03s0017g00620	EnsemblPlantsGene:VIT_03s0017g00620	EnsemblPlants:VIT_03s0017g00620.t01	unigene:Vvi.15289
unigene:Vvi.25477	RefSeq:XP_002268015	RefSeq:XP_002268015.1	:	:	:

Description

No Description!

Coordinates

chr3:+:15307070..15312462

Molecular Weight (calculated)

39125.0 Da

IEP (calculated)

6.574

GRAVY (calculated)

-0.245

Length

352 amino acids

Sequence
(BLAST)

001: MAPGTPELQP PKFPSVKSLS ESSALTSIPS SYTFTTDPNQ HIASDPQDSI PVIDFSLLTS GNPDQRSKAI QDLHRACEKW GFFMVINHGV AESLMKGMIE
101: ACRGFFDLTE EEKGEFEGKP VLAPIRCGTS SNTSLDKILF WRDFLKVFLH PQFHSLNKPP GFSEVSLEYS QRIKKVVEEL LKGISKSLGL EEWYIDKAMN
201: MSSGLQVLVA NLYPPCPQPE HAMGLPPHSD YGLLTVLTQN EVGGLQVQHQ GKWFNVNLIP NSLLVNIGDH LEVLSNGKYK SVLHRVVVNR KATRLSVLIT
301: NGPSLDTVVA PAPELIDESH PPAYFGMKFQ ETLTLSQTNK HHEKSILDQV RI

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.