Factsheet for VIT_16s0013g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0013g00730.t01	Wine grape	cytosol	45.92	81.5
AT5G07480.1	Thale cress	cytosol	58.59	58.43
Bra028696.1-P	Field mustard	cytosol	58.31	57.34
CDY65238	Canola	cytosol, nucleus, peroxisome	58.03	57.06
CDX70044	Canola	cytosol, nucleus, peroxisome	57.46	56.51
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	39.15	50.36
TraesCS2D01G487400.1	Wheat	cytosol, nucleus, peroxisome	26.48	50.27
TraesCS2A01G487100.1	Wheat	cytosol	38.03	48.91
HORVU2Hr1G108680.1	Barley	cytosol	27.61	48.76
HORVU2Hr1G108800.1	Barley	cytosol	27.61	48.76
HORVU2Hr1G117900.3	Barley	cytosol, mitochondrion, peroxisome	43.66	48.74
Os04t0667200-01	Rice	cytosol	43.94	47.85
OQU82532	Sorghum	cytosol	43.1	47.66
KXG27374	Sorghum	plastid	44.51	47.45
Os04t0667400-01	Rice	plastid	44.51	47.45
Zm00001d001927_P001	Maize	cytosol	43.66	47.4
HORVU2Hr1G117810.43	Barley	cytosol, nucleus, peroxisome	43.38	47.38
TraesCS2A01G538700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	43.1	46.93
TraesCS2B01G568800.1	Wheat	cytosol, nucleus, peroxisome	42.54	46.04
TraesCS2D01G539400.1	Wheat	cytosol, nucleus, peroxisome	42.25	45.73
TraesCS2A01G538600.1	Wheat	cytosol	42.25	45.73
TraesCS2D01G539600.1	Wheat	mitochondrion, plastid	43.66	45.59
TraesCS2B01G514200.1	Wheat	cytosol, nucleus, peroxisome	41.97	45.57
TraesCS2B01G568900.1	Wheat	mitochondrion, plastid	43.1	45.54
Zm00001d001924_P001	Maize	plastid	43.1	42.27
VIT_15s0048g02430.t01	Wine grape	cytosol	37.46	38.66
VIT_13s0047g00210.t01	Wine grape	cytosol	36.06	37.98
VIT_08s0007g04540.t01	Wine grape	cytosol	40.28	37.93
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	34.93	36.69
VIT_02s0025g02970.t01	Wine grape	cytosol	35.77	36.49
VIT_02s0025g02960.t01	Wine grape	cytosol	35.49	36.21
VIT_00s0250g00090.t01	Wine grape	cytosol	37.18	35.29
VIT_18s0001g06690.t01	Wine grape	cytosol	32.68	34.52
VIT_03s0017g00620.t01	Wine grape	cytosol	33.8	34.09
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	32.39	33.72
VIT_03s0017g00710.t01	Wine grape	plastid	31.83	32.56
VIT_18s0001g03430.t01	Wine grape	cytosol	30.14	32.23
VIT_18s0001g03470.t01	Wine grape	cytosol	29.01	31.99
VIT_03s0017g02350.t01	Wine grape	cytosol	31.55	31.55
VIT_13s0067g01020.t01	Wine grape	cytosol	30.42	30.08
VIT_08s0105g00380.t01	Wine grape	cytosol	30.14	29.89
VIT_18s0001g03490.t01	Wine grape	cytosol	27.61	29.25
VIT_18s0001g14310.t01	Wine grape	cytosol	27.32	27.09
VIT_04s0023g03370.t01	Wine grape	cytosol	27.32	26.72
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	25.92	25.92
VIT_03s0017g00830.t01	Wine grape	plastid	33.8	22.14
VIT_18s0001g03510.t01	Wine grape	cytosol	26.76	13.97

Protein Annotations

EntrezGene:100249326	wikigene:100249326	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:AM471587	ProteinID:CAN77294
ProteinID:CAN77294.1	ProteinID:CBI38582	ProteinID:CBI38582.3	UniProt:D7U768	InterPro:DIOX_N	EMBL:FN596738
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100249326
wikigene:LOC100249326	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF201	SUPFAM:SSF51197	UniParc:UPI00015C86D6	ArrayExpress:VIT_16s0013g00740	EnsemblPlantsGene:VIT_16s0013g00740	EnsemblPlants:VIT_16s0013g00740.t01
RefSeq:XP_002279001	RefSeq:XP_002279001.1	:	:	:	:

Description

No Description!

Coordinates

chr16:-:6121318..6122857

Molecular Weight (calculated)

39397.0 Da

IEP (calculated)

5.815

GRAVY (calculated)

-0.277

Length

355 amino acids

Sequence
(BLAST)

001: MEDGNTSSSF PTGKSAQEKG LSYVPGCYVV PASQRSNLTS ETTNVPVVDL SGLHDPKERS RVIKDIGSAC LRLGFFQIIN HGICQSLLDG ALSSAFQFFD
101: LPMEERLKLK STDVFKPVRY ATSLKDGLEK VQFWRIFLKH YAHPLKDWIE SWPKNPANYR ENMGKYAVEL RKLALELTGA ITESLGIGPA YLDNKMEEGM
201: QVMAANCYPA CPQPELALGL PPHSDYSCLT ILLQSSQGLE IMDADDGTWL AVPKLEGALE VHLGDHLQVL SNGLYKSVVH RATLNGERTR ISVASFHSLG
301: MDEKMETAEE LVDEQHPKGY KASSFRDFLK FLSANNIGEG QSFIETLKIK ANDVY

Best Arabidopsis Sequence Match ( AT5G07480.1 )
(BLAST)

001: MEKGEDSSTF KMGNSAQERS LPYVPDCYVV PPSSKPCDSN SGIVPTIDVS RLKGGDDERR GVIQELSLAC QHLGFFQIVN HGINQNILDD ALEVANSFFE
101: LPAKEKKQFM SNDVYAPVRY STSLKDGLDT IQFWRIFLKH YAHPLHRWIH LWPENPPGYR EKMGKFCEEV RKLSIELMGA ITESLGLGRD YLSSRMDENG
201: MQVMTVNCYP PCPDPETALG LPPHSDYSCI TLLLQNLDGL KIFDPMAHGG SGRWVGVPQV TGVLKVHIGD HVEVLSNGLY KSIVHKVTLN EEKTRISLAS
301: LHSLGMDDKM SVPRELVNDE NPVRYKESSF NDFLDFLVKN DISQGDRFID TLRIKD

Arabidopsis Description

KUOX1KAR-UP oxidoreductase 1 [Source:TAIR;Acc:AT5G07480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.