Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 88.65 | 90.88 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 92.02 | 89.29 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 92.64 | 88.82 |
| KXG27374 | Sorghum | plastid | 71.47 | 69.97 |
| Os04t0667400-01 | Rice | plastid | 67.79 | 66.37 |
| Zm00001d001924_P001 | Maize | plastid | 71.17 | 64.09 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 44.48 | 52.54 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 52.45 | 52.13 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 29.75 | 48.5 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 46.93 | 43.1 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 44.17 | 39.89 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 43.56 | 39.34 |
| AT5G07480.1 | Thale cress | cytosol | 42.94 | 39.33 |
| Bra028696.1-P | Field mustard | cytosol | 43.25 | 39.06 |
| Bra009258.1-P | Field mustard | cytosol, nucleus, peroxisome | 29.14 | 34.42 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 35.89 | 31.62 |
| TraesCS2A01G394900.1 | Wheat | plastid | 32.21 | 30.09 |
| TraesCS7A01G159200.1 | Wheat | plastid | 30.37 | 29.73 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 30.67 | 29.41 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.89 | 28.68 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 29.75 | 28.53 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 30.06 | 28.32 |
| TraesCS6A01G033300.1 | Wheat | plastid | 29.75 | 28.03 |
| TraesCS6A01G288300.1 | Wheat | plastid | 29.14 | 27.94 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 29.45 | 27.75 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 26.38 | 27.74 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 28.83 | 26.86 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 22.7 | 26.81 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 26.69 | 26.69 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 29.14 | 26.61 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 30.98 | 26.3 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 26.99 | 26.19 |
| TraesCS6A01G331400.1 | Wheat | plastid | 26.69 | 26.05 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 28.53 | 25.98 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 24.54 | 25.56 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 28.22 | 25.14 |
| TraesCS2A01G493500.1 | Wheat | golgi | 28.53 | 24.67 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 28.53 | 24.54 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 27.61 | 24.46 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 26.69 | 24.23 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 18.71 | 24.02 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 23.93 | 19.85 |
| TraesCS6A01G030500.1 | Wheat | plastid | 17.79 | 19.59 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 23.62 | 17.58 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G538700.1 | EnsemblPlantsGene:TraesCS2A01G538700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF372 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr2A:-:751493021..751494335
Molecular Weight (calculated)
35660.4 Da
IEP (calculated)
6.905
GRAVY (calculated)
-0.227
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MARHHNHQQR GAAAAAAALP VINIGRLGDK DPAARALVVQ DIARACRDRG CFQVVNHGVS KSAMDGALEA ASEFFDLPAE HKAAFACDDI RSPVRYDTSS
101: RDGISKARSF LKHYANPLHH WVDDWPTQPA TYRKKMGTYA VEMQRLSVQL IGAIVQGLGL DPMYLQEKLG AGLQFIALNN YPQGSSRAGD TVGLAPHSDI
201: GFITILLQSS PGLEVTHHDD GGVWTPVPAI PGALHVHLGD HLEVLSNGRL RSLLHRAILN TDEARISIAS IHGAAMDEKV GCADELVDEQ HPRMYRESSF
301: HDFLDFLPTN VKAYRRFVDT LKIDSA
101: RDGISKARSF LKHYANPLHH WVDDWPTQPA TYRKKMGTYA VEMQRLSVQL IGAIVQGLGL DPMYLQEKLG AGLQFIALNN YPQGSSRAGD TVGLAPHSDI
201: GFITILLQSS PGLEVTHHDD GGVWTPVPAI PGALHVHLGD HLEVLSNGRL RSLLHRAILN TDEARISIAS IHGAAMDEKV GCADELVDEQ HPRMYRESSF
301: HDFLDFLPTN VKAYRRFVDT LKIDSA
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.