Factsheet for TraesCS6A01G288300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	93.53	93.53
TraesCS6B01G317900.1	Wheat	cytosol	73.24	92.22
TraesCS6A01G288400.1	Wheat	cytosol	85.88	81.79
EES06032	Sorghum	cytosol	64.12	62.11
Zm00001d051896_P001	Maize	cytosol	62.65	60.86
TraesCS7A01G159200.1	Wheat	plastid	41.76	42.64
TraesCS6A01G033300.1	Wheat	plastid	42.65	41.91
TraesCS6A01G055700.1	Wheat	cytosol	42.35	41.62
TraesCS3A01G445000.1	Wheat	cytosol	41.47	40.29
TraesCS1A01G008400.1	Wheat	mitochondrion	38.53	40.18
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	38.53	38.42
TraesCS7A01G037700.1	Wheat	cytosol	31.18	38.41
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	35.0	38.39
TraesCS6A01G031500.1	Wheat	cytosol	28.24	37.8
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	34.12	37.66
TraesCS7A01G026100.1	Wheat	cytosol	34.41	37.38
PGSC0003DMT400025150	Potato	cytosol	35.0	36.17
PGSC0003DMT400030676	Potato	mitochondrion	35.88	35.78
KRH32174	Soybean	cytosol	35.59	35.48
Solyc09g066310.2.1	Tomato	cytosol	34.12	35.26
PGSC0003DMT400041798	Potato	cytosol	34.71	35.12
KRH18340	Soybean	cytosol	34.71	35.01
KRH01377	Soybean	cytosol, plastid	34.71	34.91
Solyc11g010410.1.1	Tomato	cytosol	34.41	34.82
KRG93692	Soybean	cytosol, nucleus, peroxisome	34.41	34.72
TraesCS5A01G513700.1	Wheat	cytosol, plastid	34.12	34.52
Solyc07g043420.2.1	Tomato	cytosol	34.71	34.5
TraesCS2A01G394900.1	Wheat	plastid	35.29	34.38
Solyc10g018190.1.1	Tomato	cytosol	32.94	34.25
TraesCS6A01G030500.1	Wheat	plastid	29.71	34.12
Solyc06g083910.2.1	Tomato	cytosol	33.53	33.83
Solyc11g010400.1.1	Tomato	cytosol	33.24	33.63
PGSC0003DMT400051681	Potato	cytosol	33.24	33.53
TraesCS2A01G395000.1	Wheat	cytosol	33.53	33.53
PGSC0003DMT400025148	Potato	cytosol	26.76	32.73
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	34.41	32.68
PGSC0003DMT400054579	Potato	cytosol	32.65	32.55
Solyc02g070080.2.1	Tomato	cytosol	32.94	32.46
Solyc10g018170.1.1	Tomato	cytosol	20.0	31.92
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	31.76	30.68
PGSC0003DMT400025139	Potato	cytosol	30.0	30.54
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	31.47	30.4
Solyc06g073580.2.1	Tomato	cytosol	31.47	30.31
TraesCS4A01G109200.1	Wheat	cytosol	32.65	30.16
TraesCS6A01G331400.1	Wheat	plastid	29.41	29.94
TraesCS3A01G351400.2	Wheat	cytosol	32.94	29.55
TraesCS4A01G311000.1	Wheat	cytosol	32.06	29.46
TraesCS2A01G538700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	27.94	29.14
TraesCS2A01G487100.1	Wheat	cytosol	23.53	28.99
TraesCS5A01G154900.1	Wheat	cytosol, nucleus, peroxisome	31.18	28.96
TraesCS5A01G515600.2	Wheat	cytosol	32.35	28.65
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.12	28.43
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	26.76	27.83
TraesCS5A01G048400.1	Wheat	cytosol	27.65	27.65
TraesCS2A01G538600.1	Wheat	cytosol	26.47	27.44
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	27.65	27.17
TraesCS2A01G493500.1	Wheat	golgi	27.65	24.93
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	26.18	24.79
TraesCS6A01G041800.1	Wheat	cytosol	26.47	22.9
TraesCS6A01G001500.1	Wheat	cytosol	26.47	20.55

Protein Annotations

EnsemblPlants:TraesCS6A01G288300.1	EnsemblPlantsGene:TraesCS6A01G288300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6A:-:520649282..520650434

Molecular Weight (calculated)

36084.1 Da

IEP (calculated)

5.858

GRAVY (calculated)

-0.171

Length

340 amino acids

Sequence
(BLAST)

001: MAAEPLSNGA THLSVPARYI LPVHNRPSSS VNGKGALPVV DLGGDDDGRI AEEIVRAGRE FGFFQVVNHG VPEEVMGAMM RAAEEFFALP EDEKMAYYSN
101: DGKKLPRFHT SLRNGAGEEV LYWRDCLKLG CHPPDWPDKP RGLGAALEPY TAAVRATARR VLRLAAVGLG LEEEHFDGSL SGGGMMNVNH YPPCPDPSLT
201: LGAGPHRDPG LVTVLMENVG GGLQMLLHGD GDAGGGGMMW VDADAAPGAL VLNFGHQMEV VSNGRLRSAE HRVVTSARAA RTSLATFVWP EPGCTVAPAP
301: ELVLAAGEGP PYKPHSYGEF LGVYLAEGGV KEAAMAHLKH

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.