Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plastid 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G344800.1 | Wheat | cytosol | 91.37 | 94.75 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 94.64 | 94.64 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 83.33 | 90.61 |
| TraesCS6A01G331400.1 | Wheat | plastid | 73.21 | 73.65 |
| Os02t0767300-01 | Rice | cytosol | 67.56 | 68.58 |
| EES07584 | Sorghum | cytosol | 66.67 | 67.47 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 61.61 | 65.71 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 61.61 | 65.71 |
| EES00073 | Sorghum | cytosol | 53.27 | 58.12 |
| GSMUA_Achr10P... | Banana | cytosol | 54.76 | 54.93 |
| GSMUA_Achr10P... | Banana | cytosol | 50.89 | 54.63 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 53.27 | 53.75 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 52.08 | 52.55 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 50.0 | 52.17 |
| AT5G08640.1 | Thale cress | cytosol | 50.6 | 50.6 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 50.0 | 50.0 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 50.0 | 50.0 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 50.0 | 50.0 |
| KRH53203 | Soybean | cytosol | 49.4 | 49.85 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 48.21 | 48.36 |
| KRH18787 | Soybean | cytosol | 47.92 | 48.2 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 49.11 | 46.88 |
| PGSC0003DMT400036565 | Potato | cytosol | 48.81 | 46.59 |
| KRH16579 | Soybean | cytosol, mitochondrion | 41.37 | 46.03 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 40.18 | 43.83 |
| Bra018076.1-P | Field mustard | cytosol | 38.99 | 42.95 |
| CDY39565 | Canola | cytosol | 38.69 | 42.62 |
| CDY41522 | Canola | cytosol | 37.5 | 42.42 |
| Bra038648.1-P | Field mustard | cytosol | 37.5 | 42.42 |
| CDY48154 | Canola | cytosol | 38.39 | 42.3 |
| AT5G43935.1 | Thale cress | cytosol | 36.01 | 41.3 |
| CDY69013 | Canola | cytosol | 37.5 | 41.04 |
| Bra038647.1-P | Field mustard | cytosol | 37.2 | 40.72 |
| CDY39860 | Canola | cytosol | 36.9 | 40.13 |
| CDX97750 | Canola | cytosol | 26.19 | 39.82 |
| CDY31361 | Canola | cytosol | 36.61 | 39.68 |
| Bra029211.1-P | Field mustard | cytosol | 36.31 | 39.35 |
| Bra037747.1-P | Field mustard | cytosol | 36.31 | 38.85 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 31.85 | 38.35 |
| AT5G63600.2 | Thale cress | cytosol | 37.2 | 38.34 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 40.48 | 37.99 |
| CDX81188 | Canola | cytosol | 36.01 | 37.81 |
| CDY41520 | Canola | cytosol | 27.68 | 37.65 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 27.98 | 37.6 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 41.07 | 37.5 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 39.29 | 36.07 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 39.58 | 35.09 |
| TraesCS7A01G159200.1 | Wheat | plastid | 33.93 | 34.23 |
| TraesCS6A01G288300.1 | Wheat | plastid | 34.52 | 34.12 |
| TraesCS2A01G394900.1 | Wheat | plastid | 35.12 | 33.81 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 37.5 | 32.06 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 32.44 | 32.06 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 32.44 | 31.5 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 33.93 | 30.81 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 25.3 | 30.8 |
| TraesCS6A01G033300.1 | Wheat | plastid | 31.55 | 30.64 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 24.7 | 30.07 |
| TraesCS2A01G493500.1 | Wheat | golgi | 33.63 | 29.97 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 31.85 | 29.97 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 30.95 | 29.71 |
| Bra029212.1-P | Field mustard | cytosol | 37.2 | 29.62 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 30.36 | 29.48 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 33.63 | 29.43 |
| CDY31363 | Canola | cytosol | 36.9 | 29.38 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.79 | 28.57 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 37.2 | 28.54 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 28.87 | 28.53 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 26.19 | 28.39 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 34.23 | 28.19 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 26.19 | 28.11 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 27.08 | 27.91 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 26.49 | 27.13 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 26.19 | 26.99 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 20.24 | 26.77 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 27.38 | 25.63 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 48.51 | 23.97 |
| TraesCS6A01G030500.1 | Wheat | plastid | 19.35 | 21.96 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G513700.1 | EnsemblPlantsGene:TraesCS5A01G513700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF165 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.5.1 | : |
Description
No Description!
Coordinates
chr5A:-:677484907..677485996
Molecular Weight (calculated)
37205.5 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.293
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVVQSVQV LASSLGALPP EFVRPEHERP PATTFRGASP LQIPVVDMSL PDAGSRMVEA AREWGIFQAV NHGVPADAVA ELQRVGREFF ALPQEEKQRY
101: AMDPASGKTE GYGSSVQRSP GDRKIWSDNL FHTISPPAAV NHGFWPEKPR GYREANEAYC GHMRRLTREV LERLSAGLGL EEGAMAEAFG GGDDGLVLMQ
201: KVNFYPPCPE PELVLGFAPH TDLCAFTVLV ADDVPGLQVS KDGRWYDVEH VPGALIVNVG DQIEILSNGR YRAVLHRVTV SKEKTRMSWP VFVHPRLEYV
301: VAPHPRLVAG EIPAKYDYKA KTFEDYMYCK INKLPQ
101: AMDPASGKTE GYGSSVQRSP GDRKIWSDNL FHTISPPAAV NHGFWPEKPR GYREANEAYC GHMRRLTREV LERLSAGLGL EEGAMAEAFG GGDDGLVLMQ
201: KVNFYPPCPE PELVLGFAPH TDLCAFTVLV ADDVPGLQVS KDGRWYDVEH VPGALIVNVG DQIEILSNGR YRAVLHRVTV SKEKTRMSWP VFVHPRLEYV
301: VAPHPRLVAG EIPAKYDYKA KTFEDYMYCK INKLPQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.