Factsheet for TraesCS2D01G027700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G493500.1
TraesCS2B01G521500.1
TraesCS2B01G613300.1
TraesCS2D01G493400.1
TraesCS3A01G226600.1
TraesCS3B01G257900.2
TraesCS3D01G224600.1
TraesCS4B01G344800.1
TraesCS4B01G344900.1
TraesCS4D01G339800.1
TraesCS5A01G475600.1
TraesCS5A01G513700.1
TraesCS5B01G488900.1
TraesCS5D01G489000.1
TraesCS6A01G331400.1
TraesCS6B01G362100.1
TraesCS6D01G310700.1
TraesCS7B01G038200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	TraesCS2A01G493500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G521500.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2B01G613300.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS2D01G493400.1	AT3G51240.1	10536025
AT5G13930.1	TraesCS5A01G475600.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5B01G488900.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS5D01G489000.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS7B01G038200.1	AT3G55120.1	10536025
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	18467451
AT5G13930.1	TraesCS4B01G344800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4B01G344900.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS4D01G339800.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS5A01G513700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6A01G331400.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6B01G362100.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS6D01G310700.1	AT5G08640.1	21669202
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	10536025
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	10536025
AT5G13930.1	TraesCS3A01G226600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS3B01G257900.2	AT5G42800.1	21669202
AT5G13930.1	TraesCS3D01G224600.1	AT5G42800.1	21669202
AT5G13930.1	TraesCS4B01G344800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4B01G344900.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS4D01G339800.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS5A01G513700.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6A01G331400.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6B01G362100.1	AT5G63590.1	18467451
AT5G13930.1	TraesCS6D01G310700.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G025600.1	Wheat	cytosol	97.97	97.97
TraesCS2D01G027900.2	Wheat	cytosol	97.97	97.97
TraesCS2A01G025500.1	Wheat	cytosol	97.72	97.72
TraesCS2D01G034500.1	Wheat	cytosol	97.72	97.47
TraesCS2B01G038600.1	Wheat	cytosol	87.82	95.58
TraesCS2D01G027800.1	Wheat	cytosol	50.51	94.31
HORVU2Hr1G004170.4	Barley	plastid	97.72	88.91
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	69.04	86.9
KRH42776	Soybean	cytosol	55.08	85.1
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	70.56	84.76
VIT_14s0068g00930.t01	Wine grape	cytosol	84.01	84.22
PGSC0003DMT400076178	Potato	cytosol	82.99	84.06
Solyc09g091510.2.1	Tomato	cytosol, extracellular	82.99	84.06
VIT_14s0068g00920.t01	Wine grape	cytosol	83.76	83.97
KRH42759	Soybean	cytosol	81.98	83.25
KRH58872	Soybean	cytosol	81.73	82.99
KRH42783	Soybean	cytosol	81.73	82.99
KRH42780	Soybean	cytosol	81.73	82.99
KRH42778	Soybean	cytosol	81.73	82.99
KRH42775	Soybean	cytosol	81.73	82.99
KRH42758	Soybean	cytosol	81.73	82.99
VIT_05s0136g00260.t01	Wine grape	cytosol	81.73	82.78
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	81.73	82.78
KRH42757	Soybean	cytosol	81.47	82.73
KRH75544	Soybean	cytosol	81.47	82.73
KRH37579	Soybean	cytosol	81.47	82.73
GSMUA_Achr10P...	Banana	cytosol	68.02	82.72
CDX91090	Canola	cytosol	82.99	82.58
CDX69618	Canola	cytosol	82.74	82.53
CDX78547	Canola	cytosol	82.49	82.49
KRH42760	Soybean	cytosol	81.22	82.47
KRH71115	Soybean	cytosol	81.22	82.47
TraesCS5D01G488700.1	Wheat	cytosol	82.49	82.28
TraesCS5D01G488600.1	Wheat	cytosol	82.49	82.28
CDY09836	Canola	cytosol	82.49	82.28
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	81.22	82.26
CDX70528	Canola	cytosol	82.49	82.07
Bra008792.1-P	Field mustard	cytosol	82.23	82.03
KRG94730	Soybean	cytosol	80.96	81.59
AT5G13930.1	Thale cress	cytosol	81.73	81.52
Bra023441.1-P	Field mustard	cytosol	81.47	81.47
Bra006224.1-P	Field mustard	cytosol	81.73	81.31
TraesCS2D01G530600.1	Wheat	cytosol, plastid	98.22	80.96
KRH77699	Soybean	endoplasmic reticulum	79.19	80.21
KRH27737	Soybean	cytosol	78.68	79.69
TraesCS1D01G033600.1	Wheat	cytosol	79.7	78.7
CDY51056	Canola	cytosol	78.68	78.68
CDY05664	Canola	cytosol	78.43	78.43
TraesCS1D01G033800.1	Wheat	cytosol	79.19	78.39
Bra036307.1-P	Field mustard	cytosol	78.17	78.37
Bra020688.1-P	Field mustard	cytosol	78.17	78.17
PGSC0003DMT400076179	Potato	cytosol	74.37	77.31
CDY07114	Canola	cytosol	77.41	74.39
GSMUA_Achr10P...	Banana	mitochondrion	63.45	72.89
CDY05666	Canola	mitochondrion	69.8	65.79
TraesCS6D01G197900.1	Wheat	cytosol	39.59	53.79
TraesCS6D01G278200.1	Wheat	cytosol	51.27	50.37
TraesCS1D01G359600.1	Wheat	cytosol	50.25	50.25
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	50.25	49.5
TraesCS3D01G500500.1	Wheat	cytosol	48.48	47.63
TraesCS7D01G046500.1	Wheat	unclear	47.72	47.59
TraesCS2D01G051300.1	Wheat	cytosol	48.22	47.38
TraesCS2D01G016200.1	Wheat	cytosol	47.21	46.62
TraesCS7D01G047000.1	Wheat	cytosol, plastid	46.7	46.23
TraesCS2D01G016100.1	Wheat	cytosol	46.19	46.19
TraesCS2D01G030600.1	Wheat	mitochondrion	44.92	45.85
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	45.94	45.82
TraesCS4D01G351300.1	Wheat	mitochondrion	45.69	45.23
TraesCS7D01G089300.1	Wheat	mitochondrion	45.18	44.84
TraesCS6D01G018500.1	Wheat	plastid	46.45	41.78
TraesCS1D01G157500.1	Wheat	cytosol	36.04	36.41
TraesCS5D01G003600.1	Wheat	cytosol	37.31	34.92

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451
ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS2D01G027700	EnsemblPlants:TraesCS2D01G027700.1	TIGR:cd00831	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:-:11476720..11478047

Molecular Weight (calculated)

43256.4 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.116

Length

394 amino acids

Sequence
(BLAST)

001: MAATMTVEEV RKAQRAEGPA TVLAIGTATP ANCVYQADYP DYYFKITKSD HMADLKEKFK RMCDKSQIRK RYMHLTEEIL QDNPNMCAYM APSLDARQDI
101: VVVEVPKLGK AAAQKAIKEW GQPRSKITHL VFCTTSGVDM PGADYQLTKM LGLRPSVKRL MMYQQGCFAG GTVLRLAKDL AENNRGARVL VVCSEITAVT
201: FRGPHESHLD SLVGQALFGD GAAAVIVGAD PDMSVERPLF QLVSASQTIL PDSEGAIDGH LREVGLTFHL LKDVPGLISK NIERALQEAF KPLGIDDWNS
301: VFWIAHPGGP AILDMVEAKV NLNKERMRAT RHVLSEYGNM SSACVLFIMD EMRKRSTEDG HTTTGEGMNW GVLFGFGPGL TVETVVLHSV PITA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.