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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51056 Canola cytosol 98.48 98.48
Bra006224.1-P Field mustard cytosol 87.56 87.12
Bra008792.1-P Field mustard cytosol 87.31 87.09
Bra023441.1-P Field mustard cytosol 86.29 86.29
Bra036307.1-P Field mustard cytosol 84.26 84.48
KRG94730 Soybean cytosol 82.23 82.86
KRH42776 Soybean cytosol 53.55 82.75
VIT_14s0068g00920.t01 Wine grape cytosol 81.98 82.19
VIT_05s0136g00260.t01 Wine grape cytosol 80.96 82.01
KRH42759 Soybean cytosol 80.46 81.7
VIT_14s0068g00930.t01 Wine grape cytosol 81.47 81.68
KRH42780 Soybean cytosol 80.2 81.44
KRH42778 Soybean cytosol 80.2 81.44
Solyc09g091510.2.1 Tomato cytosol, extracellular 80.2 81.23
KRH58872 Soybean cytosol 79.95 81.19
KRH42783 Soybean cytosol 79.95 81.19
KRH42775 Soybean cytosol 79.95 81.19
KRH42758 Soybean cytosol 79.95 81.19
KRH42757 Soybean cytosol 79.95 81.19
PGSC0003DMT400076178 Potato cytosol 79.95 80.98
KRH75544 Soybean cytosol 79.7 80.93
KRH42760 Soybean cytosol 79.44 80.67
KRH37579 Soybean cytosol 79.44 80.67
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 63.96 80.51
KRH77699 Soybean endoplasmic reticulum 79.44 80.46
KRH27737 Soybean cytosol 79.44 80.46
KRH71115 Soybean cytosol 79.19 80.41
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 66.75 80.18
GSMUA_Achr10P... Banana cytosol 65.74 79.94
Solyc05g053550.2.1 Tomato cytosol, mitochondrion 78.68 79.69
PGSC0003DMT400049165 Potato cytosol, mitochondrion 78.68 79.69
EES09858 Sorghum cytosol 79.95 78.55
EES09864 Sorghum cytosol 79.44 78.25
TraesCS2A01G035300.1 Wheat cytosol 78.17 78.17
TraesCS2D01G027700.1 Wheat cytosol 78.17 78.17
EES09865 Sorghum cytosol 79.44 78.05
TraesCS2A01G025600.1 Wheat cytosol 77.92 77.92
TraesCS2D01G027900.2 Wheat cytosol 77.92 77.92
EES09863 Sorghum cytosol 79.19 77.81
EES09860 Sorghum cytosol 79.19 77.81
EES09859 Sorghum cytosol 79.19 77.81
EES08604 Sorghum cytosol 79.19 77.81
KXG29016 Sorghum cytosol 79.19 77.81
Zm00001d052673_P001 Maize cytosol 78.93 77.75
HORVU2Hr1G005220.3 Barley cytosol 77.92 77.72
TraesCS2A01G025500.1 Wheat cytosol 77.67 77.67
TraesCS2A01G025700.1 Wheat cytosol, golgi 77.67 77.67
TraesCS2B01G038700.1 Wheat cytosol 77.67 77.67
EES09862 Sorghum cytosol 78.93 77.56
TraesCS2D01G034500.1 Wheat cytosol 77.67 77.47
TraesCS2B01G048400.1 Wheat cytosol 77.41 77.41
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 78.17 77.39
TraesCS2B01G558400.1 Wheat cytosol 78.17 77.39
Zm00001d007403_P001 Maize cytosol 78.68 77.31
TraesCS2A01G527700.2 Wheat cytosol 77.92 77.14
HORVU2Hr1G116390.2 Barley cytosol 77.67 76.88
PGSC0003DMT400076179 Potato cytosol 73.1 75.99
TraesCS2B01G038600.1 Wheat cytosol 69.04 75.14
TraesCS2B01G613100.1 Wheat cytosol 75.89 74.94
TraesCS5D01G488600.1 Wheat cytosol 74.62 74.43
TraesCS5D01G488700.1 Wheat cytosol 74.62 74.43
EES14634 Sorghum cytosol 75.13 74.37
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 73.35 73.16
TraesCS2D01G027800.1 Wheat cytosol 39.09 72.99
TraesCS1B01G041000.1 Wheat cytosol 72.84 72.66
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 72.84 72.66
TraesCS1B01G040100.1 Wheat cytosol 72.33 72.15
TraesCS1A01G032100.1 Wheat cytosol 72.33 72.15
TraesCS1D01G033600.1 Wheat cytosol 72.84 71.93
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 73.35 71.89
TraesCS1D01G033800.1 Wheat cytosol 72.33 71.61
TraesCS1A01G032300.1 Wheat cytosol 72.08 71.36
TraesCS1B01G040500.1 Wheat cytosol 72.08 71.18
HORVU1Hr1G004830.1 Barley cytosol 71.57 71.03
HORVU2Hr1G004170.4 Barley plastid 77.41 70.44
HORVU1Hr1G089540.1 Barley mitochondrion 70.81 69.92
GSMUA_Achr10P... Banana mitochondrion 60.41 69.39
Os07t0214900-00 Rice cytosol 68.53 67.0
TraesCS2D01G530600.1 Wheat cytosol, plastid 77.92 64.23
Bra000559.1-P Field mustard mitochondrion 41.12 41.33
Bra034658.1-P Field mustard cytosol 40.61 40.82
Bra011566.1-P Field mustard cytosol 40.36 40.56
Bra017681.1-P Field mustard cytosol 40.1 40.31
Bra017147.1-P Field mustard cytosol, peroxisome, plastid 39.09 17.23
Protein Annotations
KEGG:00941+2.3.1.74Gene3D:3.40.47.10MapMan:9.2.2.1.1.1EnsemblPlantsGene:Bra020688EnsemblPlants:Bra020688.1EnsemblPlants:Bra020688.1-P
InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_NGO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039
UniProt:M4DVZ4PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441PANTHER:PTHR11877
PANTHER:PTHR11877:SF43InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI0002546326:
Description
AT5G13930 (E=6e-204) CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase
Coordinates
chrA02:+:23750701..23751969
Molecular Weight (calculated)
43022.4 Da
IEP (calculated)
6.190
GRAVY (calculated)
-0.008
Length
394 amino acids
Sequence
(BLAST)
001: MVMGALSLDE IRKAQRGDGP ASILAIGTAN PPNQVIQAEY PDYYFRITNS EHMTDLKEKF KRMCDKSMIK KRYMHLTEEF LKDNPNVCAF MAPSLDVRQD
101: ILVAEVPKLG KEAAVKAITE WGQPKSKITH LVFCTTSGVD MPGADYQLIK LLGLCPSVKR VMMYHQGCYA GGTVLRVAKD IAENNRGARV LIVCSEITVV
201: TFRGPSETHL DSLVGQSLFG DGAAALIVGS DPDTSVGEKP IFEMVSAAQT ILPDSQGAIE GHLKEVGLTF HLLKTVPGLI SKNIEKCLEE AFKPLGISDW
301: NSLFWIAHPG GPAILDQVEI KLGLKPEKMK ATRHVLSEYG NMSSACVFFI LDEMRRKAVE DGAETTGEGL EWGVLFGFGP GLTVETVVLH SVPL
Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.