CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92978
KRH05848
KRH05851
KRH08080
KRH15169
KRH16579
KRH18787
KRH53203
KRH69784
KRH69787
KRH71611

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	KRH08080	AT3G51240.1	10536025
AT5G13930.1	KRH69784	AT3G51240.1	10536025
AT5G13930.1	KRH69787	AT3G51240.1	10536025
AT5G13930.1	KRG92978	AT3G55120.1	10536025
AT5G13930.1	KRH16579	AT5G08640.1	18467451
AT5G13930.1	KRH18787	AT5G08640.1	18467451
AT5G13930.1	KRH53203	AT5G08640.1	18467451
AT5G13930.1	KRH16579	AT5G08640.1	21669202
AT5G13930.1	KRH18787	AT5G08640.1	21669202
AT5G13930.1	KRH53203	AT5G08640.1	21669202
AT5G13930.1	KRH05848	AT5G42800.1	10536025
AT5G13930.1	KRH05851	AT5G42800.1	10536025
AT5G13930.1	KRH15169	AT5G42800.1	10536025
AT5G13930.1	KRH71611	AT5G42800.1	10536025
AT5G13930.1	KRH05848	AT5G42800.1	21669202
AT5G13930.1	KRH05851	AT5G42800.1	21669202
AT5G13930.1	KRH15169	AT5G42800.1	21669202
AT5G13930.1	KRH71611	AT5G42800.1	21669202
AT5G13930.1	KRH16579	AT5G63590.1	18467451
AT5G13930.1	KRH18787	AT5G63590.1	18467451
AT5G13930.1	KRH53203	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77699	Soybean	endoplasmic reticulum	98.71	98.71
KRH58872	Soybean	cytosol	91.26	91.49
KRH42783	Soybean	cytosol	91.0	91.24
KRH42757	Soybean	cytosol	91.0	91.24
KRH42758	Soybean	cytosol	91.0	91.24
KRH42759	Soybean	cytosol	91.0	91.24
KRH42775	Soybean	cytosol	91.0	91.24
KRH42780	Soybean	cytosol	90.75	90.98
KRH42778	Soybean	cytosol	90.75	90.98
KRH75544	Soybean	cytosol	90.49	90.72
KRH42776	Soybean	cytosol	59.38	90.59
KRH37579	Soybean	cytosol	90.23	90.46
KRH42760	Soybean	cytosol	90.23	90.46
KRH71115	Soybean	cytosol	89.97	90.21
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	68.38	84.98
KRG94730	Soybean	cytosol	83.55	83.12
CDX78547	Canola	cytosol	84.06	82.99
CDX70528	Canola	cytosol	84.06	82.58
AT5G13930.1	Thale cress	cytosol	83.8	82.53
CDX69618	Canola	cytosol	83.8	82.53
GSMUA_Achr10P...	Banana	cytosol	68.64	82.41
CDY09836	Canola	cytosol	83.55	82.28
Bra006224.1-P	Field mustard	cytosol	83.55	82.07
CDX91090	Canola	cytosol	83.55	82.07
Bra008792.1-P	Field mustard	cytosol	83.29	82.03
Bra023441.1-P	Field mustard	cytosol	82.52	81.47
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	68.64	81.4
EES09858	Sorghum	cytosol	82.26	79.8
Bra020688.1-P	Field mustard	cytosol	80.46	79.44
EES09865	Sorghum	cytosol	81.75	79.3
EES09864	Sorghum	cytosol	81.49	79.25
CDY51056	Canola	cytosol	80.21	79.19
KXG29016	Sorghum	cytosol	81.49	79.05
EES08604	Sorghum	cytosol	81.49	79.05
EES09859	Sorghum	cytosol	81.49	79.05
EES09862	Sorghum	cytosol	81.49	79.05
EES09860	Sorghum	cytosol	81.49	79.05
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	80.72	78.89
Zm00001d052673_P001	Maize	cytosol	80.98	78.75
TraesCS2D01G027700.1	Wheat	cytosol	79.69	78.68
TraesCS2A01G025600.1	Wheat	cytosol	79.69	78.68
TraesCS2A01G035300.1	Wheat	cytosol	79.69	78.68
EES09863	Sorghum	cytosol	80.98	78.55
TraesCS2D01G027900.2	Wheat	cytosol	79.43	78.43
TraesCS2B01G558400.1	Wheat	cytosol	80.21	78.39
TraesCS2A01G025500.1	Wheat	cytosol	79.18	78.17
CDY05664	Canola	cytosol	79.18	78.17
TraesCS2A01G527700.2	Wheat	cytosol	79.95	78.14
HORVU2Hr1G116390.2	Barley	cytosol	79.95	78.14
HORVU2Hr1G005220.3	Barley	cytosol	79.18	77.97
TraesCS2B01G048400.1	Wheat	cytosol	78.92	77.92
TraesCS2B01G038700.1	Wheat	cytosol	78.92	77.92
TraesCS2A01G025700.1	Wheat	cytosol, golgi	78.92	77.92
Bra036307.1-P	Field mustard	cytosol	78.66	77.86
TraesCS2D01G034500.1	Wheat	cytosol	78.92	77.72
Zm00001d007403_P001	Maize	cytosol	79.95	77.56
TraesCS2D01G027800.1	Wheat	cytosol	41.9	77.25
TraesCS2B01G038600.1	Wheat	cytosol	71.72	77.07
TraesCS2B01G613100.1	Wheat	cytosol	77.64	75.69
TraesCS5D01G488700.1	Wheat	cytosol	76.35	75.19
TraesCS5D01G488600.1	Wheat	cytosol	76.35	75.19
CDY07114	Canola	cytosol	76.86	72.93
TraesCS1B01G041000.1	Wheat	cytosol	73.26	72.15
GSMUA_Achr10P...	Banana	mitochondrion	63.24	71.72
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	72.49	71.39
TraesCS1A01G032100.1	Wheat	cytosol	72.24	71.14
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	72.24	71.14
HORVU2Hr1G004170.4	Barley	plastid	79.18	71.13
TraesCS1A01G032300.1	Wheat	cytosol	72.75	71.11
EES14634	Sorghum	cytosol	72.75	71.11
TraesCS1B01G040100.1	Wheat	cytosol	71.72	70.63
TraesCS1B01G040500.1	Wheat	cytosol	72.24	70.43
TraesCS1D01G033600.1	Wheat	cytosol	72.24	70.43
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	72.75	70.4
TraesCS1D01G033800.1	Wheat	cytosol	71.72	70.1
HORVU1Hr1G089540.1	Barley	mitochondrion	71.72	69.92
HORVU1Hr1G004830.1	Barley	cytosol	71.21	69.77
Os07t0214900-00	Rice	cytosol	70.69	68.24
KRH18039	Soybean	cytosol	53.73	65.72
CDY05666	Canola	mitochondrion	69.92	65.07
TraesCS2D01G530600.1	Wheat	cytosol, plastid	79.95	65.06
KRH29108	Soybean	cytosol	41.65	41.86
KRH75257	Soybean	cytosol	39.59	39.69
KRH24136	Soybean	cytosol	35.73	36.87

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	EMBL:ACUP02006733	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	EnsemblPlantsGene:GLYMA_11G011500	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	UniProt:I1LG10	InterPro:IPR016039
EnsemblPlants:KRH27737	ProteinID:KRH27737	ProteinID:KRH27737.1	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451
ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF43	MetaCyc:PWY-5135	MetaCyc:PWY-6316	MetaCyc:PWY-6787
MetaCyc:PWY-7397	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000233CCAE	:

Description

hypothetical protein

Coordinates

chr11:+:802453..804663

Molecular Weight (calculated)

42888.0 Da

IEP (calculated)

6.267

GRAVY (calculated)

-0.120

Length

389 amino acids

Sequence
(BLAST)

001: MVSVAEIRQA QRAEGPATIL AIGTANPPNC VDQSTYPDYY FRITNSEHMT ELKEKFQRMC DKSMIKRRYM YLNEEILKEN PNMCAYMAPS LDARQDMVVV
101: EVPKLGKEAA VKAIKEWGQP KSKITHLIFC TTSGVDMPGA DYQLTKQLGL RPYVKRYMMY QQGCFAGGTV LRLAKDLAEN NKGARVLVVC SEITAVTFRG
201: PSDTHLDSLV GQALFGDGAA AVIVGSDPIP QVEKPLYELV WTAQTIAPDS EGAIDGHLRE VGLTFHLLKD VPGIVSKNID KALFEAFNPL NISDYNSIFW
301: IAHPGGPAIL DQVEQKLGLK PEKMKATRDV LSEYGNMSSA CVLFILDEMR RKSAENGLKT TGEGLEWGVL FGFGPGLTIE TVVLRSVAI

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.