CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42776	Soybean	cytosol	47.8	59.61
KRH71115	Soybean	cytosol	66.04	54.12
KRH58872	Soybean	cytosol	66.04	54.12
KRH42783	Soybean	cytosol	66.04	54.12
KRH42757	Soybean	cytosol	66.04	54.12
KRH42758	Soybean	cytosol	66.04	54.12
KRH42759	Soybean	cytosol	66.04	54.12
KRH42775	Soybean	cytosol	66.04	54.12
KRH42778	Soybean	cytosol	66.04	54.12
KRH42780	Soybean	cytosol	66.04	54.12
KRH42760	Soybean	cytosol	65.72	53.87
KRH27737	Soybean	cytosol	65.72	53.73
KRH75544	Soybean	cytosol	65.41	53.61
KRH37579	Soybean	cytosol	65.41	53.61
KRH77699	Soybean	endoplasmic reticulum	65.41	53.47
KRG94730	Soybean	cytosol	63.52	51.66
PGSC0003DMT400069814	Potato	cytosol	54.09	43.88
Solyc05g053170.2.1	Tomato	cytosol	53.14	43.11
KRH29108	Soybean	cytosol	35.85	29.46
KRH75257	Soybean	cytosol	33.65	27.58
KRH24136	Soybean	cytosol	31.45	26.53

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A0R0GII5	EMBL:ACUP02008023	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
EnsemblPlantsGene:GLYMA_13G034300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlants:KRH18039	ProteinID:KRH18039
ProteinID:KRH18039.1	PFAM:PF00195	PFAM:PF02797	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0006EDD821	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:10733547..10738790

Molecular Weight (calculated)

35853.5 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.086

Length

318 amino acids

Sequence
(BLAST)

001: MVRSTRAEGP ATILAIGNAT PLNSVEQSTY SDYIVHVEHK MKLKEKFKRM CEKSMIKKQY MHLTEEIPKK NNIGEHMAPS LDARQDCGND MPDADYQLTK
101: VLNLNSNVKC YMVYQQGCFA GSTILRLAKD LVENNKGAHV LIVCSKITIF TLYGLSHINV DSLMGQAIFG DVVAAAIVGS NIIPNVEMPL FELVWTSQII
201: VPNSEGALSF HLREACLTFH LHKDVPELIP NNIEDVLDEA FKSFNIFYDY NYIFWIVHPG GLAILDLVEE KLGLKPEKMR GSKHVLSEYG NLASICVLFI
301: LDEMRRKSKE TNQSFYNG

Best Arabidopsis Sequence Match ( AT4G00040.1 )
(BLAST)

001: MLVSARVEKQ KRVAYQGKAT VLALGKALPS NVVSQENLVE EYLREIKCDN LSIKDKLQHL CKSTTVKTRY TVMSRETLHK YPELATEGSP TIKQRLEIAN
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL

Arabidopsis Description

Type III polyketide synthase C [Source:UniProtKB/Swiss-Prot;Acc:O81305]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.