CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92978
KRH05848
KRH05851
KRH08080
KRH15169
KRH16579
KRH18787
KRH53203
KRH69784
KRH69787
KRH71611

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	KRH08080	AT3G51240.1	10536025
AT5G13930.1	KRH69784	AT3G51240.1	10536025
AT5G13930.1	KRH69787	AT3G51240.1	10536025
AT5G13930.1	KRG92978	AT3G55120.1	10536025
AT5G13930.1	KRH16579	AT5G08640.1	18467451
AT5G13930.1	KRH18787	AT5G08640.1	18467451
AT5G13930.1	KRH53203	AT5G08640.1	18467451
AT5G13930.1	KRH16579	AT5G08640.1	21669202
AT5G13930.1	KRH18787	AT5G08640.1	21669202
AT5G13930.1	KRH53203	AT5G08640.1	21669202
AT5G13930.1	KRH05848	AT5G42800.1	10536025
AT5G13930.1	KRH05851	AT5G42800.1	10536025
AT5G13930.1	KRH15169	AT5G42800.1	10536025
AT5G13930.1	KRH71611	AT5G42800.1	10536025
AT5G13930.1	KRH05848	AT5G42800.1	21669202
AT5G13930.1	KRH05851	AT5G42800.1	21669202
AT5G13930.1	KRH15169	AT5G42800.1	21669202
AT5G13930.1	KRH71611	AT5G42800.1	21669202
AT5G13930.1	KRH16579	AT5G63590.1	18467451
AT5G13930.1	KRH18787	AT5G63590.1	18467451
AT5G13930.1	KRH53203	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42776	Soybean	cytosol	65.46	99.61
KRH42758	Soybean	cytosol	98.97	98.97
KRH42759	Soybean	cytosol	98.97	98.97
KRH42775	Soybean	cytosol	98.97	98.97
KRH42783	Soybean	cytosol	98.97	98.97
KRH42780	Soybean	cytosol	98.97	98.97
KRH42778	Soybean	cytosol	98.97	98.97
KRH58872	Soybean	cytosol	98.71	98.71
KRH42757	Soybean	cytosol	98.71	98.71
KRH75544	Soybean	cytosol	96.91	96.91
KRH37579	Soybean	cytosol	96.65	96.65
KRH71115	Soybean	cytosol	96.13	96.13
KRH27737	Soybean	cytosol	90.46	90.23
KRH77699	Soybean	endoplasmic reticulum	89.43	89.2
KRG94730	Soybean	cytosol	85.31	84.65
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	68.04	84.34
CDY09836	Canola	cytosol	84.02	82.53
CDX69618	Canola	cytosol	84.02	82.53
CDX78547	Canola	cytosol	83.76	82.49
CDX91090	Canola	cytosol	83.76	82.07
CDX70528	Canola	cytosol	83.76	82.07
EES09858	Sorghum	cytosol	84.79	82.04
Bra008792.1-P	Field mustard	cytosol	83.51	82.03
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	69.33	82.01
Bra006224.1-P	Field mustard	cytosol	83.25	81.57
EES09865	Sorghum	cytosol	84.28	81.55
AT5G13930.1	Thale cress	cytosol	82.99	81.52
EES09864	Sorghum	cytosol	84.02	81.5
Bra023441.1-P	Field mustard	cytosol	82.73	81.47
KXG29016	Sorghum	cytosol	84.02	81.3
EES08604	Sorghum	cytosol	84.02	81.3
EES09859	Sorghum	cytosol	84.02	81.3
EES09860	Sorghum	cytosol	84.02	81.3
EES09862	Sorghum	cytosol	84.02	81.3
Zm00001d052673_P001	Maize	cytosol	83.76	81.25
TraesCS2D01G027700.1	Wheat	cytosol	82.47	81.22
TraesCS2A01G035300.1	Wheat	cytosol	82.47	81.22
TraesCS2A01G025600.1	Wheat	cytosol	82.47	81.22
GSMUA_Achr10P...	Banana	cytosol	67.78	81.17
TraesCS2A01G025700.1	Wheat	cytosol, golgi	82.22	80.96
TraesCS2B01G038700.1	Wheat	cytosol	82.22	80.96
TraesCS2B01G558400.1	Wheat	cytosol	82.99	80.9
EES09863	Sorghum	cytosol	83.51	80.8
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	82.73	80.65
TraesCS2A01G527700.2	Wheat	cytosol	82.73	80.65
HORVU2Hr1G005220.3	Barley	cytosol	81.96	80.51
TraesCS2A01G025500.1	Wheat	cytosol	81.7	80.46
TraesCS2D01G027900.2	Wheat	cytosol	81.7	80.46
TraesCS2B01G048400.1	Wheat	cytosol	81.7	80.46
HORVU2Hr1G116390.2	Barley	cytosol	82.47	80.4
TraesCS2D01G034500.1	Wheat	cytosol	81.7	80.25
Zm00001d007403_P001	Maize	cytosol	82.73	80.05
TraesCS2B01G038600.1	Wheat	cytosol	74.48	79.83
Bra020688.1-P	Field mustard	cytosol	80.67	79.44
CDY51056	Canola	cytosol	80.15	78.93
TraesCS2B01G613100.1	Wheat	cytosol	80.67	78.45
TraesCS2D01G027800.1	Wheat	cytosol	42.53	78.2
CDY05664	Canola	cytosol	78.87	77.67
Bra036307.1-P	Field mustard	cytosol	78.35	77.35
TraesCS5D01G488700.1	Wheat	cytosol	78.61	77.22
TraesCS5D01G488600.1	Wheat	cytosol	78.61	77.22
TraesCS1B01G041000.1	Wheat	cytosol	75.26	73.92
HORVU2Hr1G004170.4	Barley	plastid	82.47	73.9
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	74.74	73.42
CDY07114	Canola	cytosol	77.58	73.41
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	74.48	73.16
EES14634	Sorghum	cytosol	75.0	73.12
TraesCS1A01G032100.1	Wheat	cytosol	74.23	72.91
TraesCS1A01G032300.1	Wheat	cytosol	74.74	72.86
TraesCS1B01G040100.1	Wheat	cytosol	73.97	72.66
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	75.0	72.39
TraesCS1D01G033600.1	Wheat	cytosol	74.23	72.18
TraesCS1B01G040500.1	Wheat	cytosol	74.23	72.18
HORVU1Hr1G089540.1	Barley	mitochondrion	73.97	71.93
TraesCS1D01G033800.1	Wheat	cytosol	73.71	71.86
HORVU1Hr1G004830.1	Barley	cytosol	73.2	71.54
GSMUA_Achr10P...	Banana	mitochondrion	62.63	70.85
Os07t0214900-00	Rice	cytosol	72.16	69.48
TraesCS2D01G530600.1	Wheat	cytosol, plastid	82.73	67.15
KRH18039	Soybean	cytosol	53.87	65.72
CDY05666	Canola	mitochondrion	70.36	65.31
KRH29108	Soybean	cytosol	40.98	41.09
KRH75257	Soybean	cytosol	39.43	39.43
KRH24136	Soybean	cytosol	35.05	36.07

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100790997	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:ABQ63059.1	EMBL:ACUP02004823
UniProt:B3F5J6	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	EnsemblPlantsGene:GLYMA_08G109500	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	EnsemblPlants:KRH42760	ProteinID:KRH42760	ProteinID:KRH42760.1	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF43	MetaCyc:PWY-5135
MetaCyc:PWY-6316	MetaCyc:PWY-6787	MetaCyc:PWY-7397	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI0001756C51	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:8397026..8398833

Molecular Weight (calculated)

42417.7 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.018

Length

388 amino acids

Sequence
(BLAST)

001: MVSVEAIRKA QRAEGPATVM AIGTATPPNC VDQSTYPDYY FRITNSEHMT ELKEKFKRMC DKSMIKKLYM YLNEEILKEN PSVCAYMAPS LDARQDMVVV
101: EVPKLGKEAA TKAIKEWGQP KSKITHLIFC TTSGVDMPGA DYQLTKLLGL RPSVKRYMMY QQGCFAGGTV LRLAKDLAEN NKGARVLVVC SEITAVTFRG
201: PTDTHLDSLV GQALFGDGAA AVIVGSDPLP VEKPLFQLIW TAQTILPDSE GAIDGHLREV GLTFHLLKDV PGLISKNIEK ALVEAFQPLG ISDYNSIFWI
301: AHPGGPAILD QVEAKLGLKP EKMEATRHVL SEYGNMSSAC VLFILDQMRK KSIENGLGTT GEGLDWGVLF GFGPGLTVET VVLRSVTV

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.