Factsheet for HORVU1Hr1G089540.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110130.3
HORVU3Hr1G056560.2
HORVU5Hr1G112670.1
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT5G13930.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	21669202
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	21669202
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G056710.2	AT5G63590.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004830.1	Barley	cytosol	85.96	86.4
HORVU2Hr1G005220.3	Barley	cytosol	78.45	79.24
HORVU2Hr1G116390.2	Barley	cytosol	78.7	78.89
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	60.4	77.0
KRH42776	Soybean	cytosol	49.12	76.86
CDX78547	Canola	cytosol	74.69	75.63
VIT_14s0068g00930.t01	Wine grape	cytosol	74.19	75.32
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	61.9	75.3
CDX70528	Canola	cytosol	74.69	75.25
Solyc09g091510.2.1	Tomato	cytosol, extracellular	73.18	75.06
CDX69618	Canola	cytosol	74.19	74.94
VIT_14s0068g00920.t01	Wine grape	cytosol	73.68	74.81
PGSC0003DMT400076178	Potato	cytosol	72.93	74.81
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	72.93	74.81
KRH58872	Soybean	cytosol	72.68	74.74
KRH42783	Soybean	cytosol	72.68	74.74
KRH42775	Soybean	cytosol	72.68	74.74
KRH42758	Soybean	cytosol	72.68	74.74
CDY09836	Canola	cytosol	73.93	74.68
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	72.68	74.55
VIT_05s0136g00260.t01	Wine grape	cytosol	72.68	74.55
Bra006224.1-P	Field mustard	cytosol	73.93	74.49
KRH42780	Soybean	cytosol	72.43	74.48
KRH42778	Soybean	cytosol	72.43	74.48
KRH42759	Soybean	cytosol	72.43	74.48
KRH42757	Soybean	cytosol	72.43	74.48
AT5G13930.1	Thale cress	cytosol	73.68	74.43
Bra008792.1-P	Field mustard	cytosol	73.68	74.43
CDX91090	Canola	cytosol	73.68	74.24
GSMUA_Achr10P...	Banana	cytosol	60.15	74.07
KRH42760	Soybean	cytosol	71.93	73.97
KRH37579	Soybean	cytosol	71.93	73.97
KRH75544	Soybean	cytosol	71.68	73.71
EES14634	Sorghum	cytosol	73.43	73.62
Bra023441.1-P	Field mustard	cytosol	72.43	73.35
KRH71115	Soybean	cytosol	70.93	72.94
HORVU2Hr1G004170.4	Barley	plastid	78.95	72.75
Os07t0214900-00	Rice	cytosol	73.43	72.7
KRG94730	Soybean	cytosol	70.68	72.12
Bra036307.1-P	Field mustard	cytosol	70.93	72.01
KRH27737	Soybean	cytosol	69.92	71.72
CDY51056	Canola	cytosol	70.68	71.57
CDY05664	Canola	cytosol	70.68	71.57
PGSC0003DMT400076179	Potato	cytosol	67.67	71.24
KRH77699	Soybean	endoplasmic reticulum	69.42	71.21
Bra020688.1-P	Field mustard	cytosol	69.92	70.81
GSMUA_Achr10P...	Banana	mitochondrion	58.15	67.64
CDY07114	Canola	cytosol	69.42	67.56
CDY05666	Canola	mitochondrion	61.9	59.09
HORVU3Hr1G006040.1	Barley	cytosol	52.38	52.51
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	50.38	50.76
HORVU2Hr1G003280.1	Barley	cytosol	48.12	48.36
HORVU4Hr1G003250.1	Barley	cytosol	50.63	48.21
HORVU1Hr1G064330.1	Barley	cytosol	47.12	47.59
HORVU6Hr1G074060.2	Barley	cytosol	47.37	46.9
HORVU7Hr1G024480.2	Barley	cytosol	45.61	46.19
HORVU7Hr1G009190.1	Barley	cytosol	44.36	45.85
HORVU6Hr1G003020.2	Barley	cytosol	45.36	43.83
HORVU2Hr1G002640.1	Barley	cytosol	43.11	43.65
HORVU5Hr1G093950.1	Barley	cytosol	41.6	41.19
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	43.11	37.07
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	37.84	33.04
HORVU1Hr1G042510.2	Barley	cytosol	36.59	30.04

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	EMBL:AK356756	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	UniProt:F2CYQ0	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009813	GO:GO:0016210	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
EnsemblPlantsGene:HORVU1Hr1G089540	EnsemblPlants:HORVU1Hr1G089540.1	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451
ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI00001278F4	SEG:seg	:	:	:	:

Description

Chalcone synthase 2 [Source:UniProtKB/TrEMBL;Acc:F2CYQ0]

Coordinates

chrchr1H:-:544054273..544055759

Molecular Weight (calculated)

43191.4 Da

IEP (calculated)

6.700

GRAVY (calculated)

0.016

Length

399 amino acids

Sequence
(BLAST)

001: MAAVRLKEVR MAQRAEGLAT VLAIGTAVPA NCVYQATYPD YYFRVTKSEH LADLKEKFQR MCDKSMIRKR HMHLTEEILI KNPKICAHME TSLDARHAIA
101: LVEVPKLGQG AAEKAIKEWG QPLSKITHLV FCTTSGVDMP GADYQLTKLL GLSPTVKRLM MYQQGCFGGA TVLRLAKDIA ENNRGARVLV VCSEITAMAF
201: RGPCKSHLDS LVGHALFGDG AAAAIIGADP DQLDEQPVFQ LVSASQTILP ESEGAIDGHL TEAGLTIHLL KDVPGLISEN IEQALEDAFE PLGIHNWNSI
301: FWIAHPGGPA ILDRVEDRVG LDKKRMRASR EVLSEYGNMS SASVLFVLDV MRKSSAKDGL ATTGEGKDWG VLFGFGPGLT VETLVLHSVP VPVPTAASA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.