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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_04s0023g02090.t01
VIT_04s0023g03370.t01
VIT_13s0067g03820.t01
VIT_18s0001g03470.t01
VIT_18s0001g03490.t01
VIT_18s0001g03510.t01
VIT_18s0001g14310.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13930.1 VIT_04s0023g03370.t01 AT3G51240.1 10536025
AT5G13930.1 VIT_18s0001g14310.t01 AT3G51240.1 10536025
AT5G13930.1 VIT_13s0067g03820.t01 AT3G55120.1 10536025
AT5G13930.1 VIT_18s0001g03470.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03490.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03510.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03470.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_18s0001g03490.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_18s0001g03510.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_04s0023g02090.t01 AT5G42800.1 10536025
AT5G13930.1 VIT_04s0023g02090.t01 AT5G42800.1 21669202
AT5G13930.1 VIT_18s0001g03470.t01 AT5G63590.1 18467451
AT5G13930.1 VIT_18s0001g03490.t01 AT5G63590.1 18467451
AT5G13930.1 VIT_18s0001g03510.t01 AT5G63590.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_14s0068g00920.t01 Wine grape cytosol 96.18 96.18
Solyc09g091510.2.1 Tomato cytosol, extracellular 88.3 89.2
VIT_05s0136g00260.t01 Wine grape cytosol 88.3 89.2
PGSC0003DMT400049165 Potato cytosol, mitochondrion 87.79 88.69
PGSC0003DMT400076178 Potato cytosol 87.79 88.69
Solyc05g053550.2.1 Tomato cytosol, mitochondrion 87.53 88.43
KRG94730 Soybean cytosol 87.79 88.24
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 69.21 86.9
CDY09836 Canola cytosol 86.26 85.82
CDX69618 Canola cytosol 86.01 85.57
CDX78547 Canola cytosol 85.75 85.53
CDX91090 Canola cytosol 86.01 85.35
Bra008792.1-P Field mustard cytosol 85.75 85.32
CDX70528 Canola cytosol 85.75 85.1
AT5G13930.1 Thale cress cytosol 85.24 84.81
Bra023441.1-P Field mustard cytosol 84.99 84.77
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 70.48 84.45
Bra006224.1-P Field mustard cytosol 84.99 84.34
EES09858 Sorghum cytosol 86.01 84.29
TraesCS2A01G025700.1 Wheat cytosol, golgi 84.48 84.26
TraesCS2B01G038700.1 Wheat cytosol 84.48 84.26
TraesCS2D01G027700.1 Wheat cytosol 84.22 84.01
GSMUA_Achr10P... Banana cytosol 69.21 83.95
TraesCS2A01G527700.2 Wheat cytosol 84.99 83.92
EES09865 Sorghum cytosol 85.5 83.79
TraesCS2A01G025600.1 Wheat cytosol 83.97 83.76
TraesCS2A01G035300.1 Wheat cytosol 83.97 83.76
EES09864 Sorghum cytosol 85.24 83.75
HORVU2Hr1G116390.2 Barley cytosol 84.73 83.67
TraesCS2B01G558400.1 Wheat cytosol 84.73 83.67
EES08604 Sorghum cytosol 85.24 83.54
EES09859 Sorghum cytosol 85.24 83.54
EES09860 Sorghum cytosol 85.24 83.54
EES09863 Sorghum cytosol 85.24 83.54
KXG29016 Sorghum cytosol 85.24 83.54
TraesCS2B01G048400.1 Wheat cytosol 83.72 83.5
TraesCS2D01G034500.1 Wheat cytosol 83.72 83.29
Zm00001d052673_P001 Maize cytosol 84.73 83.25
TraesCS2D01G027900.2 Wheat cytosol 83.46 83.25
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 84.22 83.17
EES09862 Sorghum cytosol 84.73 83.04
HORVU2Hr1G005220.3 Barley cytosol 83.46 83.04
TraesCS2A01G025500.1 Wheat cytosol 82.95 82.74
TraesCS2D01G027800.1 Wheat cytosol 44.27 82.46
Zm00001d007403_P001 Maize cytosol 83.97 82.29
PGSC0003DMT400076179 Potato cytosol 79.13 82.06
TraesCS2B01G038600.1 Wheat cytosol 75.57 82.04
Bra020688.1-P Field mustard cytosol 81.68 81.47
Bra036307.1-P Field mustard cytosol 81.42 81.42
CDY51056 Canola cytosol 81.42 81.22
TraesCS2B01G613100.1 Wheat cytosol 82.44 81.2
CDY05664 Canola cytosol 80.66 80.46
TraesCS5D01G488600.1 Wheat cytosol 79.9 79.49
TraesCS5D01G488700.1 Wheat cytosol 79.9 79.49
VIT_16s0100g00940.t01 Wine grape cytosol 77.86 78.06
VIT_16s0100g01000.t01 Wine grape cytosol 77.61 77.81
VIT_16s0100g01020.t01 Wine grape cytosol 77.61 77.81
VIT_16s0100g00900.t01 Wine grape cytosol 77.35 77.55
VIT_10s0042g00920.t01 Wine grape cytosol 76.84 77.04
VIT_16s0100g00850.t01 Wine grape cytosol 76.84 77.04
VIT_16s0100g00880.t01 Wine grape cytosol 76.84 77.04
VIT_10s0042g00930.t01 Wine grape cytosol 76.59 76.79
VIT_16s0100g00930.t01 Wine grape cytosol 76.59 76.79
VIT_16s0100g01030.t01 Wine grape cytosol 76.59 76.79
VIT_16s0100g01040.t01 Wine grape cytosol 76.59 76.79
VIT_16s0100g01140.t01 Wine grape cytosol 76.59 76.79
VIT_16s0100g00770.t01 Wine grape cytosol 76.34 76.53
VIT_16s0100g00830.t01 Wine grape cytosol 76.34 76.53
VIT_16s0100g00920.t01 Wine grape cytosol 76.34 76.53
VIT_16s0100g00990.t01 Wine grape cytosol 76.34 76.53
VIT_16s0100g01010.t01 Wine grape cytosol 76.34 76.53
VIT_16s0100g01170.t01 Wine grape cytosol 76.34 76.53
HORVU2Hr1G004170.4 Barley plastid 84.22 76.44
VIT_16s0100g00860.t01 Wine grape cytosol 69.21 76.4
CDY07114 Canola cytosol 79.64 76.34
VIT_16s0100g00800.t01 Wine grape cytosol 61.58 76.34
VIT_16s0100g00780.t01 Wine grape cytosol 76.08 76.28
VIT_16s0100g00840.t01 Wine grape cytosol 76.08 76.28
VIT_16s0100g00910.t01 Wine grape cytosol 76.08 76.28
VIT_16s0100g01150.t01 Wine grape cytosol 76.08 76.28
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 76.59 76.2
TraesCS1B01G041000.1 Wheat cytosol 76.59 76.2
EES14634 Sorghum cytosol 77.1 76.13
VIT_16s0100g00750.t01 Wine grape cytosol 75.83 76.02
VIT_16s0100g01120.t01 Wine grape cytosol 75.83 76.02
TraesCS1A01G032100.1 Wheat cytosol 76.34 75.95
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 76.34 75.95
TraesCS1B01G040100.1 Wheat cytosol 75.83 75.44
TraesCS1A01G032300.1 Wheat cytosol 76.08 75.13
TraesCS1B01G040500.1 Wheat cytosol 76.08 74.94
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 76.59 74.88
TraesCS1D01G033600.1 Wheat cytosol 75.83 74.69
TraesCS1D01G033800.1 Wheat cytosol 75.57 74.62
HORVU1Hr1G089540.1 Barley mitochondrion 75.32 74.19
HORVU1Hr1G004830.1 Barley cytosol 74.81 74.06
GSMUA_Achr10P... Banana mitochondrion 64.12 73.47
VIT_10s0042g00910.t01 Wine grape cytosol 68.19 73.22
Os07t0214900-00 Rice cytosol 74.05 72.21
TraesCS2D01G530600.1 Wheat cytosol, plastid 84.99 69.87
VIT_16s0100g01130.t01 Wine grape cytosol 75.32 69.48
VIT_16s0022g01020.t01 Wine grape cytosol 54.2 69.16
CDY05666 Canola mitochondrion 71.5 67.22
VIT_03s0038g01460.t01 Wine grape cytosol 42.24 42.35
VIT_15s0021g02170.t01 Wine grape cytosol 39.95 40.36
VIT_16s0100g01110.t01 Wine grape cytosol, mitochondrion, nucleus 64.89 4.92
VIT_12s0059g01780.t01 Wine grape extracellular, mitochondrion, nucleus 3.31 0.69
Protein Annotations
KEGG:00941+2.3.1.74EntrezGene:100263443wikigene:100263443Gene3D:3.40.47.10MapMan:9.2.2.1.1.1UniProt:A2ICC5
ProteinID:AAV48833ProteinID:AAV48833.1EMBL:AB015872ProteinID:ABM67586ProteinID:ABM67586.1ProteinID:ADP07928
ProteinID:ADP07928.1EMBL:AY656729ProteinID:BAA31259ProteinID:BAA31259.1ProteinID:CAA53583ProteinID:CAA53583.1
ProteinID:CCB46963ProteinID:CCB46963.1EntrezGene:CHSwikigene:CHSInterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_NEMBL:EF192464EMBL:FN595232GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009813GO:GO:0016020GO:GO:0016021
GO:GO:0016210GO:GO:0016740GO:GO:0016746GO:GO:0016747EMBL:GU585851InterPro:IPR016039
RefSeq:NP_001267879.1PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441PANTHER:PTHR11877
PANTHER:PTHR11877:SF43InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901TIGR:TC67855InterPro:Thiolase-likeUniParc:UPI0000EE1DCC
ArrayExpress:VIT_14s0068g00930EnsemblPlantsGene:VIT_14s0068g00930EnsemblPlants:VIT_14s0068g00930.t01unigene:Vvi.24411EMBL:X75969SEG:seg
Description
Chalcone synthase [Source:UniProtKB/TrEMBL;Acc:A2ICC5]
Coordinates
chr14:+:24686995..24688542
Molecular Weight (calculated)
42746.8 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.032
Length
393 amino acids
Sequence
(BLAST)
001: MVSVAEIRKA QRAEGPATVL AIGTATPANC VYQADYPDYY FRITNSEHMT ELKEKFKRMC EKSMINKRYM HLTEEILKEN PNVCAYMAPS LDARQDMVVV
101: EVPKLGKEAA AKAIKEWGQP KSKITHLVFC TTSGVDMPGA DYQLTKLLGL KPSVKRLMMY QQGCFAGGTV LRLAKDLAEN NAGSRVLVVC SEITAVTFRG
201: PSDTHLDSLV GQALFGDGAA AVIIGADPDT KIERPLFELV SAAQTILPDS EGAIDGHLRE VGLTFHLLKD VPGLISKNIE KSLVEAFTPI GISDWNSLFW
301: IAHPGGPAIL DQVELKLGLK EEKLRATRHV LSEYGNMSSA CVLFILDEMR KKSIEEGKGS TGEGLEWGVL FGFGPGLTVE TVVLHSVSAP AAH
Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.