Factsheet for VIT_16s0100g01000.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g01020.t01	Wine grape	cytosol	99.23	99.23
VIT_16s0100g00900.t01	Wine grape	cytosol	98.72	98.72
VIT_16s0100g00880.t01	Wine grape	cytosol	98.21	98.21
VIT_16s0100g00940.t01	Wine grape	cytosol	97.19	97.19
VIT_16s0100g00850.t01	Wine grape	cytosol	96.94	96.94
VIT_16s0100g00860.t01	Wine grape	cytosol	88.01	96.91
VIT_16s0100g00930.t01	Wine grape	cytosol	96.68	96.68
VIT_16s0100g01040.t01	Wine grape	cytosol	95.41	95.41
VIT_16s0100g00920.t01	Wine grape	cytosol	94.9	94.9
VIT_16s0100g01140.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00840.t01	Wine grape	cytosol	94.39	94.39
VIT_16s0100g00770.t01	Wine grape	cytosol	94.13	94.13
VIT_16s0100g00800.t01	Wine grape	cytosol	76.02	94.01
VIT_16s0100g01170.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g01010.t01	Wine grape	cytosol	93.88	93.88
VIT_16s0100g00830.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g01030.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00990.t01	Wine grape	cytosol	93.37	93.37
VIT_16s0100g00750.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g01150.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g01120.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g00780.t01	Wine grape	cytosol	93.11	93.11
VIT_16s0100g00910.t01	Wine grape	cytosol	93.11	93.11
VIT_10s0042g00930.t01	Wine grape	cytosol	92.09	92.09
VIT_10s0042g00920.t01	Wine grape	cytosol	92.09	92.09
VIT_10s0042g00910.t01	Wine grape	cytosol	82.91	88.8
VIT_16s0100g01130.t01	Wine grape	cytosol	92.86	85.45
VIT_14s0068g00920.t01	Wine grape	cytosol	78.06	77.86
VIT_14s0068g00930.t01	Wine grape	cytosol	77.81	77.61
VIT_05s0136g00260.t01	Wine grape	cytosol	74.49	75.06
GSMUA_Achr6P08170_001	Banana	cytosol	63.78	67.93
VIT_16s0022g01020.t01	Wine grape	cytosol	53.06	67.53
GSMUA_Achr6P08180_001	Banana	cytosol	64.29	63.0
TraesCS7B01G462200.1	Wheat	cytosol	46.68	61.2
VIT_15s0021g02170.t01	Wine grape	cytosol	40.05	40.36
VIT_03s0038g01460.t01	Wine grape	cytosol	40.05	40.05
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	79.85	6.04
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.06	0.64

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100254045	wikigene:100254045	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:AAT84818
ProteinID:AAT84818.1	ProteinID:AAT84855	ProteinID:AAT84855.1	ProteinID:AAT84860	ProteinID:AAT84860.1	ProteinID:AAT84887
ProteinID:AAT84887.1	ProteinID:AAT84889	ProteinID:AAT84889.1	ProteinID:AAT84897	ProteinID:AAT84897.1	ProteinID:AAT84904
ProteinID:AAT84904.1	ProteinID:AAT84915	ProteinID:AAT84915.1	ProteinID:AAT84938	ProteinID:AAT84938.1	ProteinID:AAT84970
ProteinID:AAT84970.1	ProteinID:AAT84974	ProteinID:AAT84974.1	EMBL:AY670151	EMBL:AY670188	EMBL:AY670193
EMBL:AY670220	EMBL:AY670222	EMBL:AY670230	EMBL:AY670237	EMBL:AY670248	EMBL:AY670271
EMBL:AY670303	EMBL:AY670307	ProteinID:CCB56436	ProteinID:CCB56436.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	UniProt:F6HP30	EMBL:FN596000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
EntrezGene:LOC100254045	wikigene:LOC100254045	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	TIGR:TC60946	InterPro:Thiolase-like
UniParc:UPI0002108546	ArrayExpress:VIT_16s0100g01000	EnsemblPlantsGene:VIT_16s0100g01000	EnsemblPlants:VIT_16s0100g01000.t01	unigene:Vvi.23781	RefSeq:XP_003634067
RefSeq:XP_003634067.1	RefSeq:XP_003634069	RefSeq:XP_003634069.1	RefSeq:XP_003634073	RefSeq:XP_003634073.1	RefSeq:XP_003634077
RefSeq:XP_003634077.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:-:16476944..16478681

Molecular Weight (calculated)

42659.5 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.051

Length

392 amino acids

Sequence
(BLAST)

001: MASVEEIRNA QRAKGPATVL AIGTATPDNC LYQSDFADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL EPSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSA AVIIGSDPDS SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENIE NCLTKAFDPI GISDWNSLFW
301: IAHPGGPAIL DAVEAKLGLD KQKLKATRHI LSEYGNMSSA CVLFILDEMR KKSLKEGKMT TGEGLDWGVL FGFGPGLTIE TVVIHSVGTD SN

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.