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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_04s0023g02090.t01
VIT_04s0023g03370.t01
VIT_13s0067g03820.t01
VIT_18s0001g03470.t01
VIT_18s0001g03490.t01
VIT_18s0001g03510.t01
VIT_18s0001g14310.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13930.1 VIT_04s0023g03370.t01 AT3G51240.1 10536025
AT5G13930.1 VIT_18s0001g14310.t01 AT3G51240.1 10536025
AT5G13930.1 VIT_13s0067g03820.t01 AT3G55120.1 10536025
AT5G13930.1 VIT_18s0001g03470.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03490.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03510.t01 AT5G08640.1 18467451
AT5G13930.1 VIT_18s0001g03470.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_18s0001g03490.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_18s0001g03510.t01 AT5G08640.1 21669202
AT5G13930.1 VIT_04s0023g02090.t01 AT5G42800.1 10536025
AT5G13930.1 VIT_04s0023g02090.t01 AT5G42800.1 21669202
AT5G13930.1 VIT_18s0001g03470.t01 AT5G63590.1 18467451
AT5G13930.1 VIT_18s0001g03490.t01 AT5G63590.1 18467451
AT5G13930.1 VIT_18s0001g03510.t01 AT5G63590.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_14s0068g00930.t01 Wine grape cytosol 89.2 88.3
VIT_14s0068g00920.t01 Wine grape cytosol 88.69 87.79
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 68.64 85.3
CDX78547 Canola cytosol 85.86 84.77
CDX69618 Canola cytosol 85.86 84.56
CDX70528 Canola cytosol 85.86 84.34
CDY09836 Canola cytosol 85.6 84.3
CDX91090 Canola cytosol 85.6 84.09
Bra008792.1-P Field mustard cytosol 85.35 84.05
AT5G13930.1 Thale cress cytosol 85.35 84.05
Bra006224.1-P Field mustard cytosol 85.09 83.59
Bra023441.1-P Field mustard cytosol 84.58 83.5
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 69.67 82.62
EES09858 Sorghum cytosol 85.09 82.54
EES09864 Sorghum cytosol 84.58 82.25
EES09865 Sorghum cytosol 84.58 82.04
KXG29016 Sorghum cytosol 84.32 81.8
EES08604 Sorghum cytosol 84.32 81.8
EES09863 Sorghum cytosol 84.32 81.8
EES09860 Sorghum cytosol 84.32 81.8
EES09859 Sorghum cytosol 84.32 81.8
GSMUA_Achr10P... Banana cytosol 68.12 81.79
TraesCS2A01G035300.1 Wheat cytosol 82.78 81.73
TraesCS2A01G025600.1 Wheat cytosol 82.78 81.73
TraesCS2D01G027700.1 Wheat cytosol 82.78 81.73
TraesCS2D01G027900.2 Wheat cytosol 82.52 81.47
TraesCS2B01G558400.1 Wheat cytosol 83.29 81.41
HORVU2Hr1G116390.2 Barley cytosol 83.29 81.41
EES09862 Sorghum cytosol 83.8 81.3
Zm00001d052673_P001 Maize cytosol 83.55 81.25
TraesCS2B01G038700.1 Wheat cytosol 82.26 81.22
TraesCS2A01G025700.1 Wheat cytosol, golgi 82.26 81.22
TraesCS2A01G527700.2 Wheat cytosol 83.03 81.16
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 83.03 81.16
HORVU2Hr1G005220.3 Barley cytosol 82.26 81.01
Bra020688.1-P Field mustard cytosol 82.01 80.96
TraesCS2B01G048400.1 Wheat cytosol 82.01 80.96
TraesCS2A01G025500.1 Wheat cytosol 82.01 80.96
TraesCS2D01G034500.1 Wheat cytosol 82.01 80.76
TraesCS2D01G027800.1 Wheat cytosol 43.7 80.57
CDY51056 Canola cytosol 81.49 80.46
Bra036307.1-P Field mustard cytosol 81.23 80.41
Zm00001d007403_P001 Maize cytosol 82.78 80.3
TraesCS2B01G038600.1 Wheat cytosol 74.04 79.56
TraesCS2B01G613100.1 Wheat cytosol 81.23 79.2
CDY05664 Canola cytosol 80.21 79.19
TraesCS5D01G488700.1 Wheat cytosol 80.21 78.99
TraesCS5D01G488600.1 Wheat cytosol 80.21 78.99
CDY07114 Canola cytosol 79.95 75.85
VIT_16s0100g01140.t01 Wine grape cytosol 75.32 74.74
VIT_16s0100g00900.t01 Wine grape cytosol 75.32 74.74
VIT_16s0100g00940.t01 Wine grape cytosol 75.32 74.74
VIT_16s0100g01150.t01 Wine grape cytosol 75.32 74.74
TraesCS1B01G041000.1 Wheat cytosol 75.84 74.68
VIT_16s0100g01030.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g00750.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g01170.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g00830.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g00850.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g00990.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g01000.t01 Wine grape cytosol 75.06 74.49
VIT_16s0100g01010.t01 Wine grape cytosol 75.06 74.49
EES14634 Sorghum cytosol 76.09 74.37
VIT_16s0100g00910.t01 Wine grape cytosol 74.81 74.23
VIT_16s0100g00930.t01 Wine grape cytosol 74.81 74.23
VIT_10s0042g00920.t01 Wine grape cytosol 74.81 74.23
VIT_16s0100g00780.t01 Wine grape cytosol 74.81 74.23
VIT_16s0100g01020.t01 Wine grape cytosol 74.81 74.23
VIT_16s0100g00770.t01 Wine grape cytosol 74.81 74.23
VIT_16s0100g01120.t01 Wine grape cytosol 74.81 74.23
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 75.32 74.18
HORVU2Hr1G004170.4 Barley plastid 82.52 74.13
VIT_16s0100g01040.t01 Wine grape cytosol 74.55 73.98
VIT_16s0100g00920.t01 Wine grape cytosol 74.55 73.98
VIT_16s0100g00880.t01 Wine grape cytosol 74.55 73.98
VIT_10s0042g00930.t01 Wine grape cytosol 74.55 73.98
VIT_16s0100g00840.t01 Wine grape cytosol 74.55 73.98
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 75.06 73.92
VIT_16s0100g00800.t01 Wine grape cytosol 60.15 73.82
TraesCS1A01G032100.1 Wheat cytosol 74.81 73.67
TraesCS1B01G040100.1 Wheat cytosol 74.55 73.42
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 75.58 73.13
TraesCS1A01G032300.1 Wheat cytosol 74.81 73.12
TraesCS1B01G040500.1 Wheat cytosol 74.81 72.93
TraesCS1D01G033600.1 Wheat cytosol 74.81 72.93
VIT_16s0100g00860.t01 Wine grape cytosol 66.58 72.75
HORVU1Hr1G089540.1 Barley mitochondrion 74.55 72.68
TraesCS1D01G033800.1 Wheat cytosol 74.29 72.61
HORVU1Hr1G004830.1 Barley cytosol 73.26 71.79
GSMUA_Achr10P... Banana mitochondrion 63.24 71.72
Os07t0214900-00 Rice cytosol 73.52 70.97
VIT_10s0042g00910.t01 Wine grape cytosol 66.07 70.22
VIT_16s0022g01020.t01 Wine grape cytosol 53.73 67.86
VIT_16s0100g01130.t01 Wine grape cytosol 74.29 67.84
TraesCS2D01G530600.1 Wheat cytosol, plastid 83.03 67.57
CDY05666 Canola mitochondrion 70.69 65.79
VIT_03s0038g01460.t01 Wine grape cytosol 42.16 41.84
VIT_15s0021g02170.t01 Wine grape cytosol 41.13 41.13
VIT_16s0100g01110.t01 Wine grape cytosol, mitochondrion, nucleus 64.27 4.83
VIT_12s0059g01780.t01 Wine grape extracellular, mitochondrion, nucleus 3.86 0.79
Protein Annotations
KEGG:00941+2.3.1.74EntrezGene:100258106wikigene:100258106Gene3D:3.40.47.10MapMan:9.2.2.1.1.1EMBL:AB066274
ProteinID:ADP07930ProteinID:ADP07930.1ProteinID:AEP17003ProteinID:AEP17003.1ProteinID:AEP17004ProteinID:AEP17004.1
EMBL:AM472295ProteinID:BAB84111ProteinID:BAB84111.1ProteinID:CAN75038ProteinID:CAN75038.1ProteinID:CCB62727
ProteinID:CCB62727.1EntrezGene:CHS3wikigene:CHS3InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_N
EMBL:FN596762GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016210GO:GO:0016740GO:GO:0016746GO:GO:0016747EMBL:GU585853InterPro:IPR016039
EMBL:JF808008EMBL:JF808009PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441
PANTHER:PTHR11877PANTHER:PTHR11877:SF43InterPro:Polyketide_synthase_type-IIIUniProt:Q8W3P6SUPFAM:SSF53901TIGR:TC67409
InterPro:Thiolase-likeUniParc:UPI00000A6A91ArrayExpress:VIT_05s0136g00260EnsemblPlantsGene:VIT_05s0136g00260EnsemblPlants:VIT_05s0136g00260.t01unigene:Vvi.1973
RefSeq:XP_002264019RefSeq:XP_002264019.1SEG:seg:::
Description
Chalcone synthase [Source:UniProtKB/TrEMBL;Acc:Q8W3P6]
Coordinates
chr5:+:13597428..13599519
Molecular Weight (calculated)
42599.6 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.132
Length
389 amino acids
Sequence
(BLAST)
001: MVTVNEVRNA QRAEGPATVM AIGTATPPNC VDQSTYPDYY FRITNSEHKT ELKEKFKRMC DKSMIKKRYM HLTEEILKEN PNVCEYMAAS LDARQDMVVV
101: EVPKLGKEAA AKAIKEWGQP KSKITHLVFC TTSGVDMPGA DYQLTKLLGL RPSVKRFMMY QQGCFAGGTV LRLAKDLAEN NKGARVLVVC SEITAVTFRG
201: PSDTHLDSLV GQALFGDGAA AVIVGSDPIP GVEKPMFELV SAAQTILPDS DGAIDGHLRE VGLTFHLLKD VPGLISKNIE KSLNEAFQPL GIKDWNSIFW
301: IAHPGGPAIL DQVEEKLALK PEKLRSTRHV LSEYGNMSSA CVLFILDEMR RKSAEEGLKT TGEGLEWGVL FGFGPGLTVE TVVLHSVST
Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.