Factsheet for VIT_16s0100g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0100g01140.t01	Wine grape	cytosol	90.14	97.96
VIT_16s0100g01170.t01	Wine grape	cytosol	89.67	97.45
VIT_16s0100g00770.t01	Wine grape	cytosol	89.67	97.45
VIT_16s0100g01030.t01	Wine grape	cytosol	89.44	97.19
VIT_16s0100g00830.t01	Wine grape	cytosol	89.44	97.19
VIT_16s0100g01150.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g01120.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g00910.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g00780.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g01010.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g00750.t01	Wine grape	cytosol	89.2	96.94
VIT_16s0100g00990.t01	Wine grape	cytosol	88.73	96.43
VIT_10s0042g00930.t01	Wine grape	cytosol	86.15	93.62
VIT_10s0042g00920.t01	Wine grape	cytosol	86.15	93.62
VIT_16s0100g00800.t01	Wine grape	cytosol	69.48	93.38
VIT_16s0100g00900.t01	Wine grape	cytosol	85.68	93.11
VIT_16s0100g01000.t01	Wine grape	cytosol	85.45	92.86
VIT_16s0100g00920.t01	Wine grape	cytosol	85.45	92.86
VIT_16s0100g00930.t01	Wine grape	cytosol	85.21	92.6
VIT_16s0100g00940.t01	Wine grape	cytosol	84.98	92.35
VIT_16s0100g00850.t01	Wine grape	cytosol	84.98	92.35
VIT_16s0100g01020.t01	Wine grape	cytosol	84.98	92.35
VIT_16s0100g00840.t01	Wine grape	cytosol	84.98	92.35
VIT_16s0100g00880.t01	Wine grape	cytosol	84.74	92.09
VIT_16s0100g01040.t01	Wine grape	cytosol	84.74	92.09
VIT_16s0100g00860.t01	Wine grape	cytosol	76.29	91.29
VIT_10s0042g00910.t01	Wine grape	cytosol	77.46	90.16
VIT_14s0068g00920.t01	Wine grape	cytosol	69.72	75.57
VIT_14s0068g00930.t01	Wine grape	cytosol	69.48	75.32
VIT_05s0136g00260.t01	Wine grape	cytosol	67.84	74.29
VIT_16s0022g01020.t01	Wine grape	cytosol	49.77	68.83
GSMUA_Achr6P08170_001	Banana	cytosol	57.51	66.58
GSMUA_Achr6P08180_001	Banana	cytosol	58.45	62.25
TraesCS7B01G462200.1	Wheat	cytosol	42.72	60.87
VIT_03s0038g01460.t01	Wine grape	cytosol	37.56	40.82
VIT_15s0021g02170.t01	Wine grape	cytosol	37.09	40.62
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	81.69	6.72
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.29	0.74

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:CCB56427	ProteinID:CCB56427.1	InterPro:Chalcone/stilbene_synth_C
InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	UniProt:F6HP21	EMBL:FN596000	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877
PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0002108542	ArrayExpress:VIT_16s0100g01130
EnsemblPlantsGene:VIT_16s0100g01130	EnsemblPlants:VIT_16s0100g01130.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:-:16618991..16624707

Molecular Weight (calculated)

46513.1 Da

IEP (calculated)

6.440

GRAVY (calculated)

-0.015

Length

426 amino acids

Sequence
(BLAST)

001: MASVEEFRNA QRAKGPATIL AIGTATPDHC VYQSDYADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPRLGRDAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSEDALDSLV GQALFGDGSS AVIVGSDPDV SIERPLFQLV SAAQTFIPNS AGAIAGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFDPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLE KKKLEATRHV LSEYGNMSSA CVLFILDEMR KKSLKGEKAT TGEGLDWGVL FGFGPGLTIE TVVLHSVPTW KKATIGEGLD
401: WGVLFGFGPG LTIETVVLHS IPTFTN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.