Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- golgi 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0100g00940.t01 | Wine grape | cytosol | 99.16 | 90.05 |
| VIT_16s0100g00850.t01 | Wine grape | cytosol | 98.88 | 89.8 |
| VIT_16s0100g00930.t01 | Wine grape | cytosol | 98.31 | 89.29 |
| VIT_16s0100g00900.t01 | Wine grape | cytosol | 97.19 | 88.27 |
| VIT_16s0100g01000.t01 | Wine grape | cytosol | 96.91 | 88.01 |
| VIT_16s0100g00880.t01 | Wine grape | cytosol | 96.63 | 87.76 |
| VIT_16s0100g01020.t01 | Wine grape | cytosol | 96.35 | 87.5 |
| VIT_16s0100g01040.t01 | Wine grape | cytosol | 95.79 | 86.99 |
| VIT_16s0100g00920.t01 | Wine grape | cytosol | 94.94 | 86.22 |
| VIT_16s0100g00840.t01 | Wine grape | cytosol | 94.38 | 85.71 |
| VIT_16s0100g01140.t01 | Wine grape | cytosol | 93.26 | 84.69 |
| VIT_16s0100g01010.t01 | Wine grape | cytosol | 93.26 | 84.69 |
| VIT_16s0100g00770.t01 | Wine grape | cytosol | 93.26 | 84.69 |
| VIT_16s0100g01170.t01 | Wine grape | cytosol | 92.7 | 84.18 |
| VIT_16s0100g00990.t01 | Wine grape | cytosol | 92.7 | 84.18 |
| VIT_16s0100g00830.t01 | Wine grape | cytosol | 92.42 | 83.93 |
| VIT_16s0100g01120.t01 | Wine grape | cytosol | 92.42 | 83.93 |
| VIT_16s0100g01030.t01 | Wine grape | cytosol | 92.42 | 83.93 |
| VIT_16s0100g00750.t01 | Wine grape | cytosol | 92.13 | 83.67 |
| VIT_16s0100g00910.t01 | Wine grape | cytosol | 92.13 | 83.67 |
| VIT_16s0100g00780.t01 | Wine grape | cytosol | 92.13 | 83.67 |
| VIT_16s0100g00800.t01 | Wine grape | cytosol | 74.44 | 83.6 |
| VIT_10s0042g00920.t01 | Wine grape | cytosol | 91.57 | 83.16 |
| VIT_16s0100g01150.t01 | Wine grape | cytosol | 91.57 | 83.16 |
| VIT_10s0042g00930.t01 | Wine grape | cytosol | 91.57 | 83.16 |
| VIT_10s0042g00910.t01 | Wine grape | cytosol | 81.18 | 78.96 |
| VIT_16s0100g01130.t01 | Wine grape | cytosol | 91.29 | 76.29 |
| VIT_14s0068g00920.t01 | Wine grape | cytosol | 76.4 | 69.21 |
| VIT_14s0068g00930.t01 | Wine grape | cytosol | 76.4 | 69.21 |
| VIT_05s0136g00260.t01 | Wine grape | cytosol | 72.75 | 66.58 |
| GSMUA_Achr6P08170_001 | Banana | cytosol | 61.8 | 59.78 |
| VIT_16s0022g01020.t01 | Wine grape | cytosol | 51.12 | 59.09 |
| GSMUA_Achr6P08180_001 | Banana | cytosol | 62.64 | 55.75 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 43.54 | 51.84 |
| VIT_15s0021g02170.t01 | Wine grape | cytosol | 38.76 | 35.48 |
| VIT_03s0038g01460.t01 | Wine grape | cytosol | 39.04 | 35.46 |
| VIT_16s0100g01110.t01 | Wine grape | cytosol, mitochondrion, nucleus | 77.53 | 5.33 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.81 | 0.53 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | ProteinID:AAT84979 | ProteinID:AAT84979.1 | EMBL:AY670312 | ProteinID:CCB56448 |
| ProteinID:CCB56448.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | UniProt:F6HP42 | EMBL:FN596000 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 |
| PANTHER:PTHR11877:SF27 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI000210854E | ArrayExpress:VIT_16s0100g00860 |
| EnsemblPlantsGene:VIT_16s0100g00860 | EnsemblPlants:VIT_16s0100g00860.t01 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr16:-:16349897..16351446
Molecular Weight (calculated)
39107.3 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.072
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVEEIRNV QRAKGPATVL AIGTATPDNC LYQSDFADYY FRVTKSEHMT ELKKKFNRIC DKSMIKKRYI HLTEEMLEEH PNIGAYMAPS LNIRQEIITA
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL EPSVRRVMLY HQGCYAETAL DSLVGQALFG DGSAAVIIGS DPDISIERPL
201: FQLVSAAQTF IPNSAGAIAG NLREVGLTFQ LWPNVPSLIS ENIEKCLTKA FDPIGISDWN SLFWIAHPGG PAILDAVEAK LSLDKQKLKA TRHILSEYGN
301: MSSACVLFIL DEMRKKSLKE GKTTTGEGLD WGVLFGFGPG LTIETVVLHS VQMDSN
101: EVPKLGKEAA LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL EPSVRRVMLY HQGCYAETAL DSLVGQALFG DGSAAVIIGS DPDISIERPL
201: FQLVSAAQTF IPNSAGAIAG NLREVGLTFQ LWPNVPSLIS ENIEKCLTKA FDPIGISDWN SLFWIAHPGG PAILDAVEAK LSLDKQKLKA TRHILSEYGN
301: MSSACVLFIL DEMRKKSLKE GKTTTGEGLD WGVLFGFGPG LTIETVVLHS VQMDSN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.