Factsheet for VIT_10s0042g00910.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0042g00920.t01	Wine grape	cytosol	94.81	88.52
VIT_10s0042g00930.t01	Wine grape	cytosol	94.54	88.27
VIT_16s0100g01170.t01	Wine grape	cytosol	90.98	84.95
VIT_16s0100g01140.t01	Wine grape	cytosol	90.98	84.95
VIT_16s0100g01010.t01	Wine grape	cytosol	90.98	84.95
VIT_16s0100g00770.t01	Wine grape	cytosol	90.71	84.69
VIT_16s0100g00830.t01	Wine grape	cytosol	90.71	84.69
VIT_16s0100g00750.t01	Wine grape	cytosol	90.71	84.69
VIT_16s0100g01030.t01	Wine grape	cytosol	90.44	84.44
VIT_16s0100g01120.t01	Wine grape	cytosol	90.44	84.44
VIT_16s0100g00910.t01	Wine grape	cytosol	90.44	84.44
VIT_16s0100g01150.t01	Wine grape	cytosol	90.44	84.44
VIT_16s0100g00990.t01	Wine grape	cytosol	90.44	84.44
VIT_16s0100g00800.t01	Wine grape	cytosol	72.95	84.23
VIT_16s0100g01040.t01	Wine grape	cytosol	90.16	84.18
VIT_16s0100g00780.t01	Wine grape	cytosol	90.16	84.18
VIT_16s0100g00920.t01	Wine grape	cytosol	89.62	83.67
VIT_16s0100g00840.t01	Wine grape	cytosol	89.62	83.67
VIT_16s0100g01020.t01	Wine grape	cytosol	89.07	83.16
VIT_16s0100g00900.t01	Wine grape	cytosol	89.07	83.16
VIT_16s0100g01000.t01	Wine grape	cytosol	88.8	82.91
VIT_16s0100g00930.t01	Wine grape	cytosol	88.8	82.91
VIT_16s0100g00940.t01	Wine grape	cytosol	88.8	82.91
VIT_16s0100g00850.t01	Wine grape	cytosol	88.52	82.65
VIT_16s0100g00880.t01	Wine grape	cytosol	87.98	82.14
VIT_16s0100g00860.t01	Wine grape	cytosol	78.96	81.18
VIT_16s0100g01130.t01	Wine grape	cytosol	90.16	77.46
VIT_14s0068g00930.t01	Wine grape	cytosol	73.22	68.19
VIT_14s0068g00920.t01	Wine grape	cytosol	73.22	68.19
VIT_05s0136g00260.t01	Wine grape	cytosol	70.22	66.07
VIT_16s0022g01020.t01	Wine grape	cytosol	51.91	61.69
TraesCS7B01G462200.1	Wheat	cytosol	49.18	60.2
GSMUA_Achr6P08170_001	Banana	cytosol	60.11	59.78
GSMUA_Achr6P08180_001	Banana	cytosol	59.84	54.75
VIT_03s0038g01460.t01	Wine grape	cytosol	39.89	37.24
VIT_15s0021g02170.t01	Wine grape	cytosol	39.07	36.76
VIT_16s0100g01110.t01	Wine grape	cytosol, mitochondrion, nucleus	78.14	5.52
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.01	0.58

Protein Annotations

KEGG:00941+2.3.1.74	EntrezGene:100244220	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	ProteinID:CCB52117	ProteinID:CCB52117.1
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	UniProt:F6HIS1	EMBL:FN595766	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00015CB813
ArrayExpress:VIT_10s0042g00910	EnsemblPlantsGene:VIT_10s0042g00910	EnsemblPlants:VIT_10s0042g00910.t01	RefSeq:XP_010655919.1	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:14284185..14285736

Molecular Weight (calculated)

40693.1 Da

IEP (calculated)

7.325

GRAVY (calculated)

-0.183

Length

366 amino acids

Sequence
(BLAST)

001: MASVEDIRNA QHAKRLATIL VIGTATPDNY AYQSDYADYY FRVTKSEHMT DLKKKFNRIC EKSMIKKRYI HLTEEMLEEH PNMGAYMAPS LNIRQEIITT
101: EVPKLGKEAT LKALKEWGQP KSKITHLVFC TTSGVEMPGA DYKLANLLGL ETSVRRVMLY HQGCYAGGTV LRTAKDLAEN NAGARVLVVC SEITVVTFRG
201: PSETHLHSLV GQALFGDGST TIIVGSDPDT SIERPLFQLI SAAQTFIPNT QGAIVGNLRE VGLTFHLWPN VPTLISENIE KCLTQAFAPL GISDWNSLFW
301: IAHPGGPAIL DAVEAKLNLE KKKLEATRHI FSEYGNMSSA CVLFILDEMR KKSLKEERTT TGKELD

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.