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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0010g03720.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02050.1 VIT_01s0010g03720.t01 AT1G62940.1 23632852
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH75257 Soybean cytosol 82.78 82.99
PGSC0003DMT400095725 Potato plastid 80.98 79.55
CDX93339 Canola mitochondrion 79.69 78.88
CDY18415 Canola cytosol, mitochondrion 79.69 78.88
AT1G02050.1 Thale cress mitochondrion 79.43 78.23
Solyc01g090600.2.1 Tomato cytosol, extracellular, mitochondrion, peroxisome 71.21 77.37
AT4G00040.1 Thale cress cytosol, mitochondrion 73.26 74.03
Bra000559.1-P Field mustard mitochondrion 74.29 73.72
CDY21499 Canola mitochondrion 74.04 73.47
CDX83215 Canola mitochondrion 73.78 73.21
VIT_03s0038g01460.t01 Wine grape cytosol 65.3 64.8
TraesCS1D01G157500.1 Wheat cytosol 63.24 63.08
TraesCS1A01G160300.1 Wheat cytosol 62.72 62.56
TraesCS1B01G176300.1 Wheat cytosol 62.72 62.56
Os10t0484800-01 Rice cytosol 62.21 62.21
Zm00001d032662_P001 Maize plastid 61.44 61.28
Zm00001d013991_P001 Maize mitochondrion 60.15 55.58
HORVU1Hr1G042510.2 Barley cytosol 62.21 49.79
EER91459 Sorghum cytosol 60.67 48.66
VIT_16s0022g01020.t01 Wine grape cytosol 33.93 42.86
VIT_16s0100g00800.t01 Wine grape cytosol 34.7 42.59
VIT_05s0136g00260.t01 Wine grape cytosol 41.13 41.13
VIT_16s0100g00990.t01 Wine grape cytosol 41.39 41.07
VIT_16s0100g01010.t01 Wine grape cytosol 41.39 41.07
VIT_16s0100g00840.t01 Wine grape cytosol 41.39 41.07
VIT_10s0042g00930.t01 Wine grape cytosol 41.39 41.07
VIT_10s0042g00920.t01 Wine grape cytosol 41.39 41.07
VIT_16s0100g01140.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00750.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00770.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g01150.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00830.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g01170.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g01120.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00910.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00920.t01 Wine grape cytosol 41.13 40.82
VIT_16s0100g00780.t01 Wine grape cytosol 40.87 40.56
VIT_16s0100g01030.t01 Wine grape cytosol 40.87 40.56
VIT_16s0100g01040.t01 Wine grape cytosol 40.62 40.31
VIT_16s0100g00900.t01 Wine grape cytosol 40.62 40.31
VIT_16s0100g00940.t01 Wine grape cytosol 40.62 40.31
VIT_16s0100g00930.t01 Wine grape cytosol 40.62 40.31
VIT_16s0100g00850.t01 Wine grape cytosol 40.62 40.31
VIT_16s0100g01000.t01 Wine grape cytosol 40.36 40.05
VIT_16s0100g01020.t01 Wine grape cytosol 40.36 40.05
VIT_16s0100g00880.t01 Wine grape cytosol 40.36 40.05
VIT_14s0068g00930.t01 Wine grape cytosol 40.36 39.95
VIT_14s0068g00920.t01 Wine grape cytosol 40.36 39.95
VIT_10s0042g00910.t01 Wine grape cytosol 36.76 39.07
VIT_16s0100g00860.t01 Wine grape cytosol 35.48 38.76
VIT_16s0100g01130.t01 Wine grape cytosol 40.62 37.09
Bra017147.1-P Field mustard cytosol, peroxisome, plastid 79.69 34.68
VIT_16s0100g01110.t01 Wine grape cytosol, mitochondrion, nucleus 36.25 2.72
VIT_12s0059g01780.t01 Wine grape extracellular, mitochondrion, nucleus 3.86 0.79
Protein Annotations
EntrezGene:100259793wikigene:100259793MapMan:21.8.1.4Gene3D:3.40.47.10EMBL:AM452412ProteinID:CAN83038
ProteinID:CAN83038.1ProteinID:CCB43863ProteinID:CCB43863.1InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_NUniProt:F6GV80
EMBL:FN594952GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039EntrezGene:LOC100259793wikigene:LOC100259793
PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451PANTHER:PTHR11877PANTHER:PTHR11877:SF31InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI00015C9A92ArrayExpress:VIT_15s0021g02170EnsemblPlantsGene:VIT_15s0021g02170EnsemblPlants:VIT_15s0021g02170.t01
unigene:Vvi.5226RefSeq:XP_002276642RefSeq:XP_002276642.1:::
Description
No Description!
Coordinates
chr15:-:13099190..13100695
Molecular Weight (calculated)
42961.4 Da
IEP (calculated)
6.670
GRAVY (calculated)
-0.135
Length
389 amino acids
Sequence
(BLAST)
001: MSQMERNGAP KHDVALARRL PMPGKATVLA MGKAFPSQLI PQECLVEGYF RDTKCQDLAI KEKLERLCKT TTVKTRYTVM SKEILEKYPE LATEGSPTIK
101: QKLEIANPAV LQMAMEASLA CIEEWGRPVG DITHIVYVSS SEIRLPGGDL YLASQLGLRS DVGRIMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KERPYDLVGA ALFGDGAAAV IVGTDPIPGK ECPFMELNHA VQQFLPGTHN VIDGRLSEEG INFKLGRDLP AKIEENIEEF CKKLMEKAGL
301: VEFNDLFWAV HPGGPAILNR LESTLKLRSE KLECSRRALM DYGNVSSNTI FYVMEYMREA LKRKGGEEWG LALAFGPGIT FEGILIRSL
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.