Factsheet for Os10t0484800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0310800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02050.1	Os04t0310800-01	AT1G62940.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G176300.1	Wheat	cytosol	91.77	91.54
TraesCS1A01G160300.1	Wheat	cytosol	91.77	91.54
TraesCS1D01G157500.1	Wheat	cytosol	91.52	91.28
Zm00001d032662_P001	Maize	plastid	84.83	84.62
Zm00001d013991_P001	Maize	mitochondrion	85.6	79.1
HORVU1Hr1G042510.2	Barley	cytosol	90.75	72.63
EER91459	Sorghum	cytosol	86.38	69.28
VIT_15s0021g02170.t01	Wine grape	cytosol	62.21	62.21
KRH75257	Soybean	cytosol	61.95	62.11
CDX93339	Canola	mitochondrion	62.47	61.83
CDY18415	Canola	cytosol, mitochondrion	61.95	61.32
AT1G02050.1	Thale cress	mitochondrion	61.95	61.01
PGSC0003DMT400095725	Potato	plastid	61.95	60.86
AT4G00040.1	Thale cress	cytosol, mitochondrion	59.13	59.74
CDX83215	Canola	mitochondrion	59.38	58.93
CDY21499	Canola	mitochondrion	59.13	58.67
Solyc01g090600.2.1	Tomato	cytosol, extracellular, mitochondrion, peroxisome	53.98	58.66
Bra000559.1-P	Field mustard	mitochondrion	58.87	58.42
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.05	56.58
Os07t0411300-00	Rice	cytosol	53.73	51.6
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	33.42	41.01
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	26.74	39.25
Os05t0212900-00	Rice	cytosol	39.07	38.78
Os10t0158400-00	Rice	cytosol	39.59	38.69
Os07t0526400-01	Rice	cytosol	39.07	38.1
Os10t0167900-00	Rice	cytosol	39.07	38.1
Os07t0271500-01	Rice	cytosol	39.33	38.06
Os07t0525900-00	Rice	cytosol	38.05	37.19
Os01t0602600-00	Rice	cytosol	31.36	36.53
Os11t0529800-00	Rice	cytosol, extracellular	37.53	36.41
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	37.02	36.18
Os10t0162856-00	Rice	cytosol	40.1	36.03
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	39.07	35.6
Os07t0501100-01	Rice	cytosol	36.76	35.31
Os07t0214900-00	Rice	cytosol	36.25	34.99
Os11t0529500-00	Rice	cytosol	37.02	34.87
Os07t0525500-00	Rice	plastid	34.96	34.78
Os05t0212600-00	Rice	cytosol	26.99	34.77
Os04t0103900-01	Rice	cytosol	34.45	34.1
Os11t0566800-01	Rice	cytosol	34.7	33.83
Bra017147.1-P	Field mustard	cytosol, peroxisome, plastid	61.95	26.96

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	EntrezGene:4348937	ProteinID:AAL59036.1	ProteinID:AAP54339.1	EMBL:AB110182
EMBL:AK105510	ProteinID:BAF26805.1	ProteinID:BAT11371.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	ProteinID:EAZ16469.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os10g0484800	EnsemblPlants:Os10t0484800-01	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	UniProt:Q7X795
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00000A9E5D	RefSeq:XP_015614404.1	SEG:seg	:

Description

polyketide synthase 1, polyketide synthase 21Polyketide synthase, type III domain containing protein. (Os10t0484800-01)

Coordinates

chr10:+:18316329..18318605

Molecular Weight (calculated)

42231.0 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.084

Length

389 amino acids

Sequence
(BLAST)

001: MADLGFGDAR SGNGSRSQCS RGKAMLLALG KGLPEQVLPQ EKVVETYLQD TICDDPATRA KLERLCKTTT VRTRYTVMSK ELLDEHPELR TEGTPTLTPR
101: LDICNAAVLE LGATAARAAL GEWGRPAADI THLVYISSSE LRLPGGDLFL ATRLGLHPNT VRTSLLFLGC SGGAAALRTA KDIAENNPGS RVLVVAAETT
201: VLGFRPPSPD RPYDLVGAAL FGDGASAAII GAGPIAAEES PFLELQFSTQ EFLPGTDKVI DGKITEEGIN FKLGRDLPEK IENRIEGFCR TLMDRVGIKE
301: FNDVFWAVHP GGPAILNRLE VCLELQPEKL KISRKALMNY GNVSSNTVFY VLEYLRDELK KGMIREEWGL ILAFGPGITF EGMLVRGIN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.