Factsheet for Os01t0602600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	12.87	56.58
OQU83321	Sorghum	cytosol	65.27	53.3
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	60.18	51.67
Os04t0103900-01	Rice	cytosol	58.98	50.13
Os11t0566800-01	Rice	cytosol	59.88	50.13
HORVU1Hr1G064330.1	Barley	cytosol	57.19	48.35
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	38.92	41.01
Os07t0214900-00	Rice	cytosol	49.4	40.94
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	48.2	40.45
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	29.64	37.36
Os10t0167900-00	Rice	cytosol	41.02	34.34
Os10t0158400-00	Rice	cytosol	40.72	34.17
Os11t0529800-00	Rice	cytosol, extracellular	40.42	33.67
Os07t0526400-01	Rice	cytosol	39.82	33.33
Os07t0501100-01	Rice	cytosol	40.12	33.09
Os07t0271500-01	Rice	cytosol	39.82	33.08
Os05t0212900-00	Rice	cytosol	38.62	32.91
Os07t0525500-00	Rice	plastid	38.32	32.74
Os07t0525900-00	Rice	cytosol	38.92	32.66
Os11t0529500-00	Rice	cytosol	40.12	32.45
Os10t0162856-00	Rice	cytosol	41.62	32.1
Os10t0484800-01	Rice	cytosol	36.53	31.36
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	39.52	30.91
Os07t0411300-00	Rice	cytosol	37.13	30.62
Os05t0212600-00	Rice	cytosol	25.75	28.48

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A0P0V4Z5	ProteinID:BAS73038.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os01g0602600	EnsemblPlants:Os01t0602600-00	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF35	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI0003939DA1	SEG:seg	:	:	:

Description

POLYKETIDE SYNTHASE 1Similar to OSIGBa0148I18.6 protein. (Os01t0602600-00)

Coordinates

chr1:-:23688285..23689293

Molecular Weight (calculated)

34893.1 Da

IEP (calculated)

6.361

GRAVY (calculated)

0.138

Length

334 amino acids

Sequence
(BLAST)

001: SRSVTCTRPT TCCAAYNSTS LTLRQELANH GVPRLGAEAA RAAIADWGGR ASDITHLVFV TSTSGCLPGA DFELLGLLGL PPSTKRAMVY QAGCYGGGTA
101: LRLAKDLAEN SPGARVLVVC SEVIALVLRG PSESHVGNLV GQAIFGDAAG AVVVGSCPAA AAGERAMFEI VSASQEVVPG TRDAVVSELR EEGIVFTLHR
201: DVPRQIGDSI GRLVERALLA QQQPANAAIG AADAAAPDLN GMFWVVHAGG REILDRMESK LGLGKEKLEA SRAVMAQYGN TRSSCVVLVM EEMRRRSEER
301: GLRTAGEGLD MGMLVGFGPG LTVETIVLRA LPIN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.