Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G327900.1 | Wheat | cytosol | 59.45 | 71.56 |
| TraesCS6A01G298400.1 | Wheat | cytosol | 70.65 | 70.82 |
| TraesCS6D01G278200.1 | Wheat | cytosol | 70.4 | 70.57 |
| EER99419 | Sorghum | cytosol | 70.9 | 70.54 |
| HORVU6Hr1G074060.2 | Barley | cytosol | 69.15 | 68.98 |
| Zm00001d021562_P001 | Maize | cytosol, mitochondrion | 68.91 | 68.91 |
| Zm00001d000438_P001 | Maize | cytosol, mitochondrion | 68.91 | 68.91 |
| Os07t0525900-00 | Rice | cytosol | 58.96 | 59.55 |
| Os11t0529125-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 11.19 | 59.21 |
| Os07t0526400-01 | Rice | cytosol | 58.71 | 59.15 |
| Os11t0529800-00 | Rice | cytosol, extracellular | 54.23 | 54.36 |
| Os05t0212900-00 | Rice | cytosol | 52.24 | 53.57 |
| Os07t0525500-00 | Rice | plastid | 51.74 | 53.2 |
| Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 41.79 | 53.0 |
| Os10t0158400-00 | Rice | cytosol | 52.24 | 52.76 |
| Os07t0501100-01 | Rice | cytosol | 52.74 | 52.35 |
| Os11t0529500-00 | Rice | cytosol | 53.73 | 52.3 |
| Os10t0167900-00 | Rice | cytosol | 51.74 | 52.13 |
| Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 49.75 | 50.25 |
| Os05t0212600-00 | Rice | cytosol | 37.31 | 49.67 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 52.74 | 49.65 |
| Os10t0162856-00 | Rice | cytosol | 52.99 | 49.19 |
| Os07t0214900-00 | Rice | cytosol | 48.76 | 48.64 |
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 31.59 | 47.92 |
| Os04t0103900-01 | Rice | cytosol | 40.8 | 41.73 |
| Os01t0602600-00 | Rice | cytosol | 33.08 | 39.82 |
| Os11t0566800-01 | Rice | cytosol | 39.3 | 39.6 |
| Os10t0484800-01 | Rice | cytosol | 38.06 | 39.33 |
| Os07t0411300-00 | Rice | cytosol | 39.05 | 38.77 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.23 | 0.69 |
Protein Annotations
| Gene3D:3.40.47.10 | PDB:3ALE | PDB:3OIT | EntrezGene:4342896 | MapMan:50.2.3 | EMBL:AK109558 |
| ProteinID:BAC79571.1 | ProteinID:BAD31021.1 | ProteinID:BAF21259.1 | ProteinID:BAT00940.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009813 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | GO:GO:0042802 |
| GO:GO:0102452 | InterPro:IPR016039 | EnsemblPlantsGene:Os07g0271500 | EnsemblPlants:Os07t0271500-01 | PFAM:PF00195 | PFAM:PF02797 |
| PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF45 | InterPro:Polyketide_synthase_type-III | UniProt:Q8LIL0 | SUPFAM:SSF53901 |
| InterPro:Thiolase-like | UniParc:UPI00001B3958 | RefSeq:XP_015646196.1 | SEG:seg | : | : |
Description
POLYKETIDE SYNTHASE 9Similar to Chalcone synthase. (Os07t0271500-01)
Coordinates
chr7:+:10018726..10020733
Molecular Weight (calculated)
43215.0 Da
IEP (calculated)
5.141
GRAVY (calculated)
0.017
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTTTMGSA LYPLGEMRRS QRADGLAAVL AIGTANPPNC VTQEEFPDFY FRVTNSDHLT ALKDKFKRIC QEMGVQRRYL HHTEEMLSAH PEFVDRDAPS
101: LDARLDIAAD AVPELAAEAA KKAIAEWGRP AADITHLVVT TNSGAHVPGV DFRLVPLLGL RPSVRRTMLH LNGCFAGCAA LRLAKDLAEN SRGARVLVVA
201: AELTLMYFTG PDEGCFRTLL VQGLFGDGAA AVIVGADADD VERPLFEIVS AAQTIIPESD HALNMRFTER RLDGVLGRQV PGLIGDNVER CLLDMFGPLL
301: GGDGGGGWND LFWAVHPGSS TIMDQVDAAL GLEPGKLAAS RRVLSDYGNM SGATVIFALD ELRRQRKEAA AAGEWPELGV MMAFGPGMTV DAMLLHATSH
401: VN
101: LDARLDIAAD AVPELAAEAA KKAIAEWGRP AADITHLVVT TNSGAHVPGV DFRLVPLLGL RPSVRRTMLH LNGCFAGCAA LRLAKDLAEN SRGARVLVVA
201: AELTLMYFTG PDEGCFRTLL VQGLFGDGAA AVIVGADADD VERPLFEIVS AAQTIIPESD HALNMRFTER RLDGVLGRQV PGLIGDNVER CLLDMFGPLL
301: GGDGGGGWND LFWAVHPGSS TIMDQVDAAL GLEPGKLAAS RRVLSDYGNM SGATVIFALD ELRRQRKEAA AAGEWPELGV MMAFGPGMTV DAMLLHATSH
401: VN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.