Factsheet for Os07t0411300-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0310800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34850.1	Os04t0310800-01	AT1G62940.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98407	Sorghum	cytosol	88.64	85.89
TraesCS5B01G003100.1	Wheat	cytosol	88.15	85.2
TraesCS5D01G003600.1	Wheat	cytosol	88.4	85.04
Zm00001d019478_P001	Maize	cytosol	87.41	84.89
TraesCS5A01G002900.1	Wheat	cytosol	88.4	84.83
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	89.88	79.65
KRH29108	Soybean	cytosol	68.4	71.58
VIT_03s0038g01460.t01	Wine grape	cytosol	68.89	71.17
CDX75466	Canola	cytosol	67.9	70.15
Bra011566.1-P	Field mustard	cytosol	67.65	69.9
CDX69091	Canola	cytosol	67.65	69.9
CDY34811	Canola	cytosol	67.41	69.64
PGSC0003DMT400004133	Potato	cytosol	65.19	69.47
Bra034658.1-P	Field mustard	cytosol	67.16	69.39
CDY40656	Canola	cytosol	66.91	69.13
Bra017681.1-P	Field mustard	cytosol	66.91	69.13
AT4G34850.1	Thale cress	cytosol	66.67	68.88
CDY58814	Canola	cytosol	66.67	68.88
CDY17490	Canola	cytosol	66.67	68.88
Solyc01g111070.2.1	Tomato	cytosol	64.94	68.67
CDX72506	Canola	cytosol	66.42	68.62
KRH24136	Soybean	cytosol	61.73	66.31
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.12	53.95
Os10t0484800-01	Rice	cytosol	51.6	53.73
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	31.6	40.38
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	39.01	39.7
Os10t0167900-00	Rice	cytosol	38.52	39.1
Os07t0271500-01	Rice	cytosol	38.77	39.05
Os07t0526400-01	Rice	cytosol	38.27	38.85
Os10t0158400-00	Rice	cytosol	37.78	38.44
Os05t0212900-00	Rice	cytosol	36.54	37.76
Os07t0525900-00	Rice	cytosol	37.04	37.69
Os01t0602600-00	Rice	cytosol	30.62	37.13
Os07t0501100-01	Rice	cytosol	37.04	37.04
Os11t0529800-00	Rice	cytosol, extracellular	36.54	36.91
Os07t0214900-00	Rice	cytosol	36.3	36.48
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	67.65	36.44
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	23.7	36.23
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	37.04	35.13
Os04t0103900-01	Rice	cytosol	34.07	35.11
Os10t0162856-00	Rice	cytosol	37.28	34.87
Os11t0529500-00	Rice	cytosol	35.56	34.87
Os07t0525500-00	Rice	plastid	33.58	34.78
Os11t0566800-01	Rice	cytosol	33.83	34.34
Os05t0212600-00	Rice	cytosol	24.2	32.45

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	EntrezGene:4343009	ProteinID:BAC21541.1	ProteinID:BAF21363.2	ProteinID:BAT01127.1
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010584	GO:GO:0016043
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0019748	GO:GO:0030639	GO:GO:0080110
GO:GO:0090439	InterPro:IPR016039	EnsemblPlantsGene:Os07g0411300	EnsemblPlants:Os07t0411300-00	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	UniProt:Q8H305	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI00000AD8AA	RefSeq:XP_015646301.1	SEG:seg	:	:

Description

POLYKETIDE SYNTHASE 10Polyketide synthase, type III domain containing protein. (Os07t0411300-00)

Coordinates

chr7:-:12884746..12886091

Molecular Weight (calculated)

43789.6 Da

IEP (calculated)

5.959

GRAVY (calculated)

-0.178

Length

405 amino acids

Sequence
(BLAST)

001: MVSTNAGGIA SKQASSMAPN PGKATILALG HAFPQQLVMQ DYVVDGFMRN TNCDDPELKE KLTRLCKTTT VKTRYVVMSE EILKSYPELA QEGQPTMKQR
101: LDISNKAVTQ MATEASLACV RSWGGALSEI THLVYVSSSE ARFPGGDLHL ARALGLSPDV RRVMLAFTGC SGGVAGLRVA KGLAESCPGA RVLLATSETT
201: IVGFRPPSPD RPYDLVGVAL FGDGAGAAVV GADPTPVERP LFELHSALQR FLPDTDKTID GRLTEEGIKF QLGRELPHII EANVEAFCQK LMQEHPQAAD
301: KLTYGDMFWA VHPGGPAILT KMEGRLGLDG GKLRASRSAL RDFGNASSNT IVYVLENMVE ETRQRREEAA EEEDCEWGLI LAFGPGITFE GILARNLQAR
401: ARARD

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.