Factsheet for Os11t0529800-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0529500-00	Rice	cytosol	81.05	78.69
EES08596	Sorghum	cytosol	64.84	63.57
OQU83574	Sorghum	cytosol	63.34	62.72
KXG28549	Sorghum	cytosol	39.4	61.48
EES08602	Sorghum	cytosol, mitochondrion	61.35	60.74
EES08598	Sorghum	cytosol	60.6	60.15
EES08603	Sorghum	cytosol, mitochondrion	61.6	58.95
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.97	57.89
Os07t0526400-01	Rice	cytosol	55.86	56.14
Os07t0525900-00	Rice	cytosol	55.36	55.78
Os07t0271500-01	Rice	cytosol	54.36	54.23
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	41.9	53.0
Os07t0501100-01	Rice	cytosol	51.37	50.86
Os10t0158400-00	Rice	cytosol	50.37	50.75
Os05t0212900-00	Rice	cytosol	49.13	50.26
Os10t0167900-00	Rice	cytosol	49.63	49.87
Os07t0525500-00	Rice	plastid	48.38	49.62
Os10t0162856-00	Rice	cytosol	51.37	47.58
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	46.88	47.24
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	49.88	46.84
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	30.67	46.42
Os07t0214900-00	Rice	cytosol	45.64	45.41
Os05t0212600-00	Rice	cytosol	33.42	44.37
Os04t0103900-01	Rice	cytosol	41.9	42.75
Os01t0602600-00	Rice	cytosol	33.67	40.42
Os11t0566800-01	Rice	cytosol	37.91	38.1
Os10t0484800-01	Rice	cytosol	36.41	37.53
Os07t0411300-00	Rice	cytosol	36.91	36.54
Zm00001d052675_P002	Maize	plastid	61.35	33.38
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.99	0.64

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4350634	MapMan:50.2.3	ProteinID:ABA94119.1	ProteinID:BAF28370.1	ProteinID:BAT14275.1
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os11g0529800
EnsemblPlants:Os11t0529800-00	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF29
InterPro:Polyketide_synthase_type-III	UniProt:Q2R3A5	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0000682145	RefSeq:XP_015616270.1
SEG:seg	:	:	:	:	:

Description

POLYKETIDE SYNTHASE 24Similar to Chalcone synthase. (Os11t0529800-00)

Coordinates

chr11:+:19236424..19238358

Molecular Weight (calculated)

42392.0 Da

IEP (calculated)

6.321

GRAVY (calculated)

0.070

Length

401 amino acids

Sequence
(BLAST)

001: MAARQQHAAV LAIGTANPAK CVVAQEEFVD WYFRVTQSDH LPDLKAKMKR MCDKSAIKKR HFYHSEETIA GHPEFINRAL PSLDARLGIA KDAVPELAMA
101: AAARAIAEWG RPAADVTHLV VSTNAGAHAP GADARLAALL GLRATVQRAV LYMHGCNAGC TALRLAKDIA ENNRGARVLV ACAEVTLPLF AAPYEARLDA
201: LVAMALFGDG AGAAVVGADP TTPVEHPIFH VVSASQATIP GTEEGVSLLL GERGLDCRIS GEVAALVRGG VERCLLDALT PLGLGAGAGG WNHLFWAMHP
301: GGRAILDAYE AALRLEPGKL AASRRVLSEY GNMSCAAIIF VLDELRRRCR RDGGEEEEES DEYCEWGAMV GLGPGLTIET IVLRATGGGH VDDEGKKSIA
401: A

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.