Factsheet for Os10t0162856-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0158400-00	Rice	cytosol	86.37	93.97
Os10t0167900-00	Rice	cytosol	79.21	85.96
Os05t0212900-00	Rice	cytosol	76.21	84.18
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	60.51	82.65
Os05t0212600-00	Rice	cytosol	56.12	80.46
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	77.6	78.69
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	47.81	78.11
EES15184	Sorghum	cytosol	64.9	68.54
TraesCS4B01G357800.1	Wheat	cytosol	47.11	68.46
TraesCS4B01G357600.1	Wheat	mitochondrion	37.88	67.77
TraesCS2B01G041300.1	Wheat	cytosol	60.05	67.36
TraesCS4B01G357700.1	Wheat	mitochondrion	36.72	67.09
TraesCS2D01G030600.1	Wheat	mitochondrion	58.43	65.54
TraesCS4D01G351300.1	Wheat	mitochondrion	59.58	64.82
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	58.89	63.91
TraesCS4B01G357100.1	Wheat	mitochondrion	48.5	63.83
TraesCS6A01G015300.1	Wheat	cytosol	59.12	63.52
TraesCS6B01G022300.1	Wheat	cytosol	57.97	62.44
TraesCS6A01G015500.1	Wheat	cytosol, plastid	58.2	61.76
TraesCS6B01G022500.1	Wheat	cytosol	57.97	61.07
HORVU6Hr1G003020.2	Barley	cytosol	58.2	61.02
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	53.81	58.69
Os07t0501100-01	Rice	cytosol	54.73	58.52
TraesCS6D01G018500.1	Wheat	plastid	57.74	57.08
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	9.47	53.95
Os07t0525900-00	Rice	cytosol	48.73	53.02
Os07t0271500-01	Rice	cytosol	49.19	52.99
Os07t0526400-01	Rice	cytosol	48.73	52.88
Os11t0529800-00	Rice	cytosol, extracellular	47.58	51.37
Os11t0529500-00	Rice	cytosol	48.96	51.33
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	46.19	50.25
Os07t0525500-00	Rice	plastid	44.57	49.36
Os07t0214900-00	Rice	cytosol	44.57	47.89
Os01t0602600-00	Rice	cytosol	32.1	41.62
Os11t0566800-01	Rice	cytosol	37.41	40.6
Os10t0484800-01	Rice	cytosol	36.03	40.1
Os04t0103900-01	Rice	cytosol	36.03	39.69
Os07t0411300-00	Rice	cytosol	34.87	37.28
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.46	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A0P0XSB0	ProteinID:BAT10009.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os10g0162856	EnsemblPlants:Os10t0162856-00
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0003938953	SEG:seg	:	:

Description

POLYKETIDE SYNTHASE 17Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0162856-00)

Coordinates

chr10:+:4226902..4229142

Molecular Weight (calculated)

47262.6 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.103

Length

433 amino acids

Sequence
(BLAST)

001: MPGATTAAIV DSRRCTQHSE GPATVLAIGT ANPENIILQD DFADYYFGLT KSEQLTELKD KMKRICNMYK CPTICFNFLY LTSGLLSTNQ YTRGFSFCIS
101: GHKSGIEKRY IHLNAEIIRA HPEIIDKHVP SLETRVDIVA TEVPKLAESA ARKAIAEWGR PATDITHLIF STYSGCRAPS ADLQLASLLG LRPSVSRTIL
201: SLHGCSGGGR ALQLAKEIAE NNRGARVLVA CSELTLICFS TPDESKIVGH GLFGDGAGAV IVGADPSADG EHPLFEMVAA SQTMIPGTEH ALGMQATSSG
301: IDFHLSIQVP TLIKDNIHQC LLDVFRSVGN TDPNWNDLFW AVHPGGRAIL DNIEDKLQLQ PWKLAASRQV LSEYGNMSGA TIAFVLDELR RHREKEEDMQ
401: QQPEWGVLLA FGPGVTIETI VLRNPLSRGL KEN

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.