Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 80.87 | 99.59 |
| TraesCS4B01G357700.1 | Wheat | mitochondrion | 78.86 | 99.16 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 93.96 | 70.35 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 93.62 | 69.92 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 73.15 | 66.26 |
| Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 66.11 | 62.15 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 83.56 | 61.94 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 83.56 | 60.58 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 76.51 | 59.07 |
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 49.66 | 55.85 |
| EES15184 | Sorghum | cytosol | 73.49 | 53.41 |
| Os05t0212900-00 | Rice | cytosol | 67.11 | 51.02 |
| Os10t0158400-00 | Rice | cytosol | 67.79 | 50.75 |
| Os10t0167900-00 | Rice | cytosol | 65.77 | 49.12 |
| Os10t0162856-00 | Rice | cytosol | 68.46 | 47.11 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 60.74 | 46.53 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 66.44 | 46.37 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 57.38 | 43.07 |
| Os05t0212600-00 | Rice | cytosol | 42.95 | 42.38 |
| TraesCS2B01G006800.1 | Wheat | cytosol | 52.68 | 42.2 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 54.36 | 40.4 |
| TraesCS2B01G019200.1 | Wheat | cytosol | 53.36 | 40.05 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 53.69 | 39.9 |
| TraesCS2B01G006700.1 | Wheat | cytosol | 52.68 | 39.85 |
| TraesCS2B01G006000.1 | Wheat | cytosol | 52.68 | 39.85 |
| TraesCS2B01G007000.1 | Wheat | cytosol | 52.68 | 39.25 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 51.68 | 38.89 |
| TraesCS2B01G038600.1 | Wheat | cytosol | 46.31 | 38.12 |
| TraesCS6B01G327900.1 | Wheat | cytosol | 42.62 | 38.02 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 40.6 | 36.01 |
| TraesCS2B01G048400.1 | Wheat | cytosol | 47.32 | 35.79 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 46.64 | 35.28 |
| TraesCS2B01G558400.1 | Wheat | cytosol | 46.64 | 34.92 |
| TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 45.64 | 34.43 |
| TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 45.64 | 34.43 |
| TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 53.36 | 34.42 |
| TraesCS2B01G613100.1 | Wheat | cytosol | 45.97 | 34.34 |
| TraesCS1B01G040100.1 | Wheat | cytosol | 45.3 | 34.18 |
| TraesCS1B01G040500.1 | Wheat | cytosol | 45.64 | 34.09 |
| TraesCS1B01G041000.1 | Wheat | cytosol | 44.97 | 33.92 |
| TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 45.64 | 33.83 |
| TraesCS7B01G371700.1 | Wheat | plastid | 47.65 | 32.35 |
| TraesCS1B01G176300.1 | Wheat | cytosol | 41.61 | 31.79 |
| TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 40.6 | 31.11 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 41.28 | 29.36 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 28.52 | 28.43 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.02 | 0.48 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G357800.1 | EnsemblPlantsGene:TraesCS4B01G357800 | Gene3D:3.40.47.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| InterPro:IPR016039 | InterPro:Polyketide_synthase_type-III | InterPro:Thiolase-like | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF23 | PFAM:PF00195 |
| PFAM:PF02797 | SEG:seg | SUPFAM:SSF53901 | TIGR:cd00831 | MapMan:50.2.3 | : |
Description
No Description!
Coordinates
chr4B:+:648243609..648244505
Molecular Weight (calculated)
31326.0 Da
IEP (calculated)
5.835
GRAVY (calculated)
0.194
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVDAVPKLA QCAAAKAIAE WGRPAADITH LVFSTYSACQ APTADLRLAA LLGLRPMVSR TMLSLHGCYG GGRALSLAKE LAENNRGARV LVACSEMTLV
101: CFGAPDGGNI VGHALFGDGA GAVVVGAGPF LDGEQGPIFE MVSATQTTIP RTEHALGMRV SGGGIDFHLA IQVPTLVGQS VEPCLLDAFH GIIVDDDDAP
201: PPCSGNGNGN GRWNDLFWAV HPGGRPILDN IDKVLMLEPE KLAASRHVLR EYGNMSGATI VFVLDELRRG RSPLPEWGAL LAFGPGITIE AMVLRCPR
101: CFGAPDGGNI VGHALFGDGA GAVVVGAGPF LDGEQGPIFE MVSATQTTIP RTEHALGMRV SGGGIDFHLA IQVPTLVGQS VEPCLLDAFH GIIVDDDDAP
201: PPCSGNGNGN GRWNDLFWAV HPGGRPILDN IDKVLMLEPE KLAASRHVLR EYGNMSGATI VFVLDELRRG RSPLPEWGAL LAFGPGITIE AMVLRCPR
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.