Factsheet for TraesCS2B01G006800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G006700.1	Wheat	cytosol	98.66	93.15
TraesCS2D01G016100.1	Wheat	cytosol	97.04	91.62
HORVU2Hr1G002640.1	Barley	cytosol	93.28	88.07
TraesCS2B01G006000.1	Wheat	cytosol	91.67	86.55
TraesCS2B01G006300.1	Wheat	extracellular, golgi	98.92	79.65
TraesCS2A01G014800.1	Wheat	cytosol	76.88	72.59
TraesCS2B01G019200.1	Wheat	cytosol	66.4	62.22
TraesCS2B01G072600.1	Wheat	mitochondrion	63.98	59.35
TraesCS2B01G007000.1	Wheat	cytosol	62.37	58.0
TraesCS4B01G357800.1	Wheat	cytosol	42.2	52.68
TraesCS6B01G327900.1	Wheat	cytosol	47.04	52.4
TraesCS2B01G041300.1	Wheat	cytosol	53.23	51.3
TraesCS5B01G487700.1	Wheat	cytosol	54.57	51.26
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	53.49	51.16
TraesCS4B01G357700.1	Wheat	mitochondrion	32.53	51.05
TraesCS4B01G357600.1	Wheat	mitochondrion	33.06	50.83
TraesCS7B01G371700.1	Wheat	plastid	58.06	49.2
TraesCS4B01G021600.1	Wheat	cytosol	52.96	49.13
TraesCS6B01G022300.1	Wheat	cytosol	51.61	47.76
TraesCS6B01G022500.1	Wheat	cytosol	51.61	46.72
TraesCS4B01G357100.1	Wheat	mitochondrion	41.13	46.5
TraesCS6B01G245200.1	Wheat	mitochondrion	41.67	46.13
TraesCS2B01G038600.1	Wheat	cytosol	42.2	43.37
TraesCS2B01G038700.1	Wheat	cytosol	45.16	42.64
TraesCS2B01G048400.1	Wheat	cytosol	45.16	42.64
TraesCS2B01G613100.1	Wheat	cytosol	45.7	42.61
TraesCS2B01G558400.1	Wheat	cytosol	45.43	42.46
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	44.09	41.52
TraesCS1B01G041000.1	Wheat	cytosol	44.09	41.52
TraesCS7B01G462200.1	Wheat	cytosol	33.33	41.47
TraesCS1B01G040500.1	Wheat	cytosol	44.35	41.35
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	43.82	41.27
TraesCS1B01G040100.1	Wheat	cytosol	43.55	41.01
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	44.09	40.8
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	39.52	37.79
TraesCS1B01G176300.1	Wheat	cytosol	36.56	34.87
TraesCS5B01G003100.1	Wheat	cytosol	36.02	31.98
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.96	0.58

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2B01G006800	EnsemblPlants:TraesCS2B01G006800.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2B:+:4425195..4426546

Molecular Weight (calculated)

40165.1 Da

IEP (calculated)

5.099

GRAVY (calculated)

0.012

Length

372 amino acids

Sequence
(BLAST)

001: MLAIGTANPA NKVSQEEYPD YYFRVTKSEH LTDHKDTFKI ICGLTGTENR FFYHTDELLN SHPVLLENTS PSREARHDIV AKAAPELAAA AAKKAIAKWG
101: RPASDITHLI VSTNSDAGAP SADVRLVSLL GLRADVCHTM LHLNGCFAGC SALRLAKDLA ENNCGARVLV ACVELAISGF CSPGEGDCLD TLITHALFGD
201: GAGAVIVGAD PMHPIENPLF EMVSVSQTLV PSTENVLTLN LGSNGTHGKV YTKLPTLVAD TMEPCLLEAF GPLEMDFQWN DLFWAVHPGS RGILDQLDKT
301: LQLEPTKLAA SRTVVQKFGN MFSATVIFVL DELQRRMEEE GEQAEWGAMV GFGPGFTIET MVLHATGALK KN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.