Factsheet for TraesCS6B01G185200.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09649	Sorghum	cytosol	73.01	70.65
HORVU1Hr1G064330.1	Barley	cytosol	71.72	70.63
Os01t0602600-00	Rice	cytosol	51.67	60.18
Os11t0566800-01	Rice	cytosol	59.9	58.4
TraesCS2B01G038700.1	Wheat	cytosol	49.1	48.48
TraesCS2B01G038600.1	Wheat	cytosol	44.99	48.34
TraesCS2B01G048400.1	Wheat	cytosol	48.84	48.22
TraesCS2B01G613100.1	Wheat	cytosol	49.1	47.87
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	48.59	47.85
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	48.59	47.85
TraesCS2B01G558400.1	Wheat	cytosol	48.84	47.74
TraesCS1B01G040100.1	Wheat	cytosol	48.33	47.59
TraesCS1B01G041000.1	Wheat	cytosol	48.33	47.59
TraesCS1B01G040500.1	Wheat	cytosol	48.59	47.37
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	48.84	47.26
TraesCS7B01G462200.1	Wheat	cytosol	34.19	44.48
TraesCS2B01G041300.1	Wheat	cytosol	41.39	41.71
TraesCS4B01G357100.1	Wheat	mitochondrion	35.22	41.64
TraesCS6B01G327900.1	Wheat	cytosol	35.48	41.32
TraesCS2B01G007000.1	Wheat	cytosol	42.16	41.0
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	40.87	40.87
TraesCS2B01G072600.1	Wheat	mitochondrion	41.9	40.65
TraesCS4B01G357800.1	Wheat	cytosol	31.11	40.6
TraesCS2B01G019200.1	Wheat	cytosol	41.13	40.3
TraesCS4B01G357700.1	Wheat	mitochondrion	24.42	40.08
TraesCS6B01G022300.1	Wheat	cytosol	41.13	39.8
TraesCS4B01G357600.1	Wheat	mitochondrion	24.68	39.67
TraesCS5B01G487700.1	Wheat	cytosol	40.36	39.65
TraesCS2B01G006800.1	Wheat	cytosol	37.79	39.52
TraesCS4B01G021600.1	Wheat	cytosol	40.62	39.4
TraesCS6B01G245200.1	Wheat	mitochondrion	33.16	38.39
TraesCS2B01G006700.1	Wheat	cytosol	38.56	38.07
TraesCS6B01G022500.1	Wheat	cytosol	40.1	37.96
TraesCS2B01G006000.1	Wheat	cytosol	38.3	37.82
TraesCS7B01G371700.1	Wheat	plastid	40.62	35.99
TraesCS1B01G176300.1	Wheat	cytosol	35.48	35.38
TraesCS5B01G003100.1	Wheat	cytosol	35.73	33.17
TraesCS2B01G006300.1	Wheat	extracellular, golgi	38.82	32.68

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF33	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6B01G185200	EnsemblPlants:TraesCS6B01G185200.2	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr6B:-:210595652..210597741

Molecular Weight (calculated)

42771.7 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.074

Length

389 amino acids

Sequence
(BLAST)

001: MGFCVSGTRA TIMGIGTAVP TNVLQQSSFS DYYFETTNSN HMVDLKAKFA NICEKTMIEK RHLYMSDEFI RSSPSITAYN SPSLNLRQGL ADAAIPQLGA
101: EAARHAIADW GRQASNITHL VFCTTVSGCM PGADFELIKL LDLPLSTRRF MLYQAGCHGA GISMRLAKDL AENNHGSRVL VVCSEVITMA FRGPSKSHMG
201: NLVGQAIFDD AAGAIIIGAE PTGNERPLFE MVSASQDIIP GTEEMVVSKL YEDGIVYTLH RDVALHISRN IEGRVKKALE RASLLTKDWN EELFWVVHPG
301: GREILDKVES SLVLRKEKMD VSRKVMAQHG NTLSSCVIVV MDEMRKRSRK RGLPTAGEGL EWGLLFSFGP GLTVETILLR ALHNQEPNA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.