Factsheet for TraesCS4B01G357100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G357800.1	Wheat	cytosol	66.26	73.15
TraesCS4B01G357600.1	Wheat	mitochondrion	51.06	69.42
TraesCS4B01G357700.1	Wheat	mitochondrion	49.54	68.78
TraesCS6B01G022300.1	Wheat	cytosol	79.33	64.93
TraesCS2B01G041300.1	Wheat	cytosol	74.77	63.73
TraesCS6B01G022500.1	Wheat	cytosol	77.81	62.29
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	48.94	60.75
Os05t0212600-00	Rice	cytosol	53.5	58.28
EES15184	Sorghum	cytosol	70.52	56.59
Os10t0158400-00	Rice	cytosol	63.83	52.76
Os05t0212900-00	Rice	cytosol	62.01	52.04
Os10t0167900-00	Rice	cytosol	62.31	51.38
TraesCS6B01G245200.1	Wheat	mitochondrion	50.46	49.4
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	58.36	49.36
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	47.42	49.21
Os10t0162856-00	Rice	cytosol	63.83	48.5
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	61.7	47.54
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	55.93	46.35
TraesCS6B01G327900.1	Wheat	cytosol	44.98	44.31
TraesCS4B01G021600.1	Wheat	cytosol	53.19	43.64
TraesCS5B01G487700.1	Wheat	cytosol	51.37	42.68
TraesCS7B01G462200.1	Wheat	cytosol	38.6	42.47
TraesCS2B01G072600.1	Wheat	mitochondrion	51.06	41.9
TraesCS2B01G006800.1	Wheat	cytosol	46.5	41.13
TraesCS2B01G007000.1	Wheat	cytosol	49.85	41.0
TraesCS2B01G019200.1	Wheat	cytosol	49.24	40.81
TraesCS2B01G006700.1	Wheat	cytosol	48.02	40.1
TraesCS2B01G006000.1	Wheat	cytosol	48.02	40.1
TraesCS2B01G048400.1	Wheat	cytosol	45.59	38.07
TraesCS2B01G038700.1	Wheat	cytosol	45.29	37.82
TraesCS2B01G613100.1	Wheat	cytosol	45.59	37.59
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	44.98	37.47
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	44.98	37.47
TraesCS2B01G558400.1	Wheat	cytosol	45.29	37.44
TraesCS1B01G040100.1	Wheat	cytosol	44.68	37.22
TraesCS1B01G040500.1	Wheat	cytosol	44.98	37.09
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	44.98	36.82
TraesCS1B01G041000.1	Wheat	cytosol	44.07	36.71
TraesCS2B01G038600.1	Wheat	cytosol	39.51	35.91
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	41.64	35.22
TraesCS2B01G006300.1	Wheat	extracellular, golgi	48.63	34.63
TraesCS7B01G371700.1	Wheat	plastid	42.55	31.89
TraesCS1B01G176300.1	Wheat	cytosol	35.56	30.0
TraesCS5B01G003100.1	Wheat	cytosol	37.69	29.59
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.13	0.37

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4B01G357100	EnsemblPlants:TraesCS4B01G357100.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4B:-:647692308..647693964

Molecular Weight (calculated)

34831.8 Da

IEP (calculated)

6.727

GRAVY (calculated)

-0.051

Length

329 amino acids

Sequence
(BLAST)

001: MGSSGGAAAR RHAAMLGIGT ANPTGILGPQ DVFADNLFRV TNSDHLPELK EKLKRICEKS GIEKRHFHLT EETLAAHPEL LDRELPSLDT RVDMTADAVP
101: KLAQCAAAKA IAEWGRPAAD ITHLVFSTYS TCQAPSADLR LATLLGLRAT VSRTMLSLHG CYGGGRALSL AKELAENNRG ARVLVACSEM TLVCFGAPDG
201: GNIVGHTLFG DGAGAVVVGA GPFLDGERRP IFEMVSATQT TIPRTEHALG MRVSGGGIDF HLAIQVPTLV GQNVERCLVD AFRGIIVDDD DAPPPCSGNG
301: NGNGNARWNE LFWAVHPGGR PILDKITRC

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.