Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- peroxisome 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 59.31 | 70.94 |
| TraesCS4B01G357800.1 | Wheat | cytosol | 62.15 | 66.11 |
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 50.16 | 65.7 |
| Os10t0158400-00 | Rice | cytosol | 82.02 | 65.33 |
| TraesCS4B01G357700.1 | Wheat | mitochondrion | 48.58 | 64.98 |
| Os05t0212900-00 | Rice | cytosol | 78.55 | 63.52 |
| Os10t0167900-00 | Rice | cytosol | 79.81 | 63.41 |
| Os10t0162856-00 | Rice | cytosol | 82.65 | 60.51 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 78.86 | 58.55 |
| TraesCS2D01G030600.1 | Wheat | mitochondrion | 67.82 | 55.7 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 67.51 | 55.44 |
| Os05t0212600-00 | Rice | cytosol | 51.42 | 53.97 |
| EES15184 | Sorghum | cytosol | 68.45 | 52.93 |
| Os11t0529125-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 12.62 | 52.63 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 65.3 | 51.88 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 64.98 | 51.76 |
| TraesCS6A01G015300.1 | Wheat | cytosol | 65.3 | 51.36 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 64.35 | 50.75 |
| TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 64.04 | 49.75 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 64.04 | 49.39 |
| HORVU6Hr1G003020.2 | Barley | cytosol | 63.72 | 48.91 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 49.21 | 47.42 |
| TraesCS6D01G018500.1 | Wheat | plastid | 63.41 | 45.89 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 56.15 | 44.84 |
| Os07t0525500-00 | Rice | plastid | 53.94 | 43.73 |
| Os07t0501100-01 | Rice | cytosol | 54.57 | 42.72 |
| Os11t0529800-00 | Rice | cytosol, extracellular | 53.0 | 41.9 |
| Os07t0271500-01 | Rice | cytosol | 53.0 | 41.79 |
| Os07t0526400-01 | Rice | cytosol | 52.05 | 41.35 |
| Os07t0525900-00 | Rice | cytosol | 51.42 | 40.95 |
| Os11t0529500-00 | Rice | cytosol | 53.0 | 40.68 |
| Os01t0602600-00 | Rice | cytosol | 41.01 | 38.92 |
| Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 47.63 | 37.94 |
| Os07t0214900-00 | Rice | cytosol | 45.43 | 35.73 |
| Os10t0484800-01 | Rice | cytosol | 41.01 | 33.42 |
| Os07t0411300-00 | Rice | cytosol | 40.38 | 31.6 |
| Os11t0566800-01 | Rice | cytosol | 39.75 | 31.58 |
| Os04t0103900-01 | Rice | cytosol | 38.49 | 31.04 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.84 | 0.48 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | UniProt:A0A0P0XSC7 | ProteinID:BAT10100.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | EnsemblPlantsGene:Os10g0177300 | EnsemblPlants:Os10t0177300-00 | PFAM:PF00195 |
| PFAM:PF02797 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF23 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like |
| UniParc:UPI000393BBC9 | SEG:seg | : | : | : | : |
Description
POLYKETIDE SYNTHASE 20Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0177300-00)
Coordinates
chr10:-:5334799..5336178
Molecular Weight (calculated)
34317.3 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.094
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: RGAHTCPPRD HRQKPALPEA RVDIASIEVP KLAESAARKA ITEWGRPATD ITYLIFSTYS GWRAPSADLQ LATLLGLRPT VSRTILSLHG CSGGSRALQL
101: AKEIAENNHG ARVLVALSEL TLVCFSTPDE SKIVGHGLFR DGAGAIIVGA NPLADGERPL FEMVAASQTM IPGTEHALGL QATDKGIDFH LSIQVLTVIK
201: DNIHQCLLDA FQSVGNKDPN WNDLFWAVHP GGRAILDNIE GKLQLEPGKL AASRHVLSEY GNMSGAMIAF VLDELRRRRE KEEGVQQQPE WGVMLAFGPG
301: ITVEAMVLRN PFSTGIN
101: AKEIAENNHG ARVLVALSEL TLVCFSTPDE SKIVGHGLFR DGAGAIIVGA NPLADGERPL FEMVAASQTM IPGTEHALGL QATDKGIDFH LSIQVLTVIK
201: DNIHQCLLDA FQSVGNKDPN WNDLFWAVHP GGRAILDNIE GKLQLEPGKL AASRHVLSEY GNMSGAMIAF VLDELRRRRE KEEGVQQQPE WGVMLAFGPG
301: ITVEAMVLRN PFSTGIN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.