Factsheet for TraesCS4D01G351300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	95.23	94.99
TraesCS4B01G357800.1	Wheat	cytosol	70.35	93.96
TraesCS4B01G357600.1	Wheat	mitochondrion	57.04	93.8
TraesCS4B01G357700.1	Wheat	mitochondrion	55.78	93.67
TraesCS2D01G030600.1	Wheat	mitochondrion	74.87	77.2
TraesCS6D01G018500.1	Wheat	plastid	81.16	73.74
EES15184	Sorghum	cytosol	70.85	68.78
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	51.76	64.98
Os10t0158400-00	Rice	cytosol	64.82	64.82
Os05t0212900-00	Rice	cytosol	63.57	64.54
Os10t0167900-00	Rice	cytosol	62.81	62.66
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	40.95	61.51
Os10t0162856-00	Rice	cytosol	64.82	59.58
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	63.57	59.25
Os05t0212600-00	Rice	cytosol	44.72	58.94
TraesCS1D01G359600.1	Wheat	cytosol	58.29	58.88
TraesCS6D01G197900.1	Wheat	cytosol	42.21	57.93
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	56.28	56.42
TraesCS6D01G278200.1	Wheat	cytosol	54.27	53.87
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	52.76	52.5
TraesCS7D01G046500.1	Wheat	unclear	52.01	52.41
TraesCS2D01G016200.1	Wheat	cytosol	51.26	51.13
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	50.5	50.89
TraesCS7D01G089300.1	Wheat	mitochondrion	50.75	50.88
TraesCS2D01G051300.1	Wheat	cytosol	51.26	50.87
TraesCS3D01G500500.1	Wheat	cytosol	51.26	50.87
TraesCS2D01G016100.1	Wheat	cytosol	50.25	50.76
TraesCS7D01G047000.1	Wheat	cytosol, plastid	49.5	49.5
TraesCS2D01G027800.1	Wheat	cytosol	25.13	47.39
TraesCS2D01G027900.2	Wheat	cytosol	45.73	46.19
TraesCS1D01G033600.1	Wheat	cytosol	45.98	45.86
TraesCS2D01G034500.1	Wheat	cytosol	45.48	45.82
TraesCS1D01G033800.1	Wheat	cytosol	45.73	45.73
TraesCS2D01G027700.1	Wheat	cytosol	45.23	45.69
TraesCS5D01G488700.1	Wheat	cytosol	44.22	44.56
TraesCS5D01G488600.1	Wheat	cytosol	44.22	44.56
TraesCS1D01G157500.1	Wheat	cytosol	36.93	37.69
TraesCS2D01G530600.1	Wheat	cytosol, plastid	44.97	37.45
TraesCS5D01G003600.1	Wheat	cytosol	39.2	37.05
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.76	0.58

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4D01G351300	EnsemblPlants:TraesCS4D01G351300.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4D:+:503175798..503177447

Molecular Weight (calculated)

42281.2 Da

IEP (calculated)

6.933

GRAVY (calculated)

0.033

Length

398 amino acids

Sequence
(BLAST)

001: MAMGSCGIRG GAAARRHAAM LGIGTANPTG LLVPQDVFAE NLFRVTNSDH LPELKEKLKR ICEKSGIEKR HFHLTEETVA AHPELLDREL PSLDTRVDMT
101: ADAVPKLAQC AAAKAIAEWG RPAADITHLV FSTYSACQAP SADLRLAALL GLRPTVSRTM LSLHGCYGGG RALSLAKELA ENNRGARVLV ACSEMTLVCF
201: GAPDGGNIVG HALFGDGAGA VVVGAGPFLD GERRPIFEMV SATQTTIPRT EHALGMRVSG GGIDFHLAIQ VPTLVGQNVE QCLLDAFRGA IVEDDGGAAP
301: PPSPCSGNGN GRWNELFWAV HPGGRPILDK IDKVLMLEPE KLAASRHVLR EYGNMSGATI VFVLDELRRG RSPLPEWGAL LAFGPGITIE AMVLRCPR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.