Factsheet for TraesCS3D01G500500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G051300.1	Wheat	cytosol	99.75	99.75
TraesCS2B01G072600.1	Wheat	mitochondrion	90.02	90.02
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	88.03	88.25
HORVU2Hr1G003280.1	Barley	cytosol	86.53	87.41
TraesCSU01G143400.1	Wheat	cytosol, mitochondrion	82.04	81.64
TraesCSU01G000100.1	Wheat	cytosol, mitochondrion	82.04	81.64
Os07t0526400-01	Rice	cytosol	67.08	67.42
Os07t0525900-00	Rice	cytosol	66.83	67.34
TraesCS2D01G016200.1	Wheat	cytosol	66.58	66.92
TraesCS7D01G046500.1	Wheat	unclear	63.84	64.81
TraesCS7D01G089300.1	Wheat	mitochondrion	63.59	64.23
TraesCS2D01G016100.1	Wheat	cytosol	61.85	62.94
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	61.85	62.78
TraesCS7D01G047000.1	Wheat	cytosol, plastid	61.1	61.56
TraesCS6D01G278200.1	Wheat	cytosol	59.85	59.85
TraesCS6D01G197900.1	Wheat	cytosol	43.14	59.66
Os07t0525500-00	Rice	plastid	57.86	59.34
TraesCS1D01G359600.1	Wheat	cytosol	57.61	58.63
TraesCS2D01G030600.1	Wheat	mitochondrion	51.87	53.89
TraesCS4D01G351300.1	Wheat	mitochondrion	50.87	51.26
TraesCS2D01G027800.1	Wheat	cytosol	26.43	50.24
TraesCS2D01G027900.2	Wheat	cytosol	48.13	48.98
TraesCS2D01G034500.1	Wheat	cytosol	47.88	48.61
TraesCS2D01G027700.1	Wheat	cytosol	47.63	48.48
TraesCS1D01G033600.1	Wheat	cytosol	47.63	47.87
TraesCS1D01G033800.1	Wheat	cytosol	47.38	47.74
TraesCS5D01G488700.1	Wheat	cytosol	46.88	47.59
TraesCS5D01G488600.1	Wheat	cytosol	46.88	47.59
TraesCS6D01G018500.1	Wheat	plastid	51.87	47.49
TraesCS2D01G530600.1	Wheat	cytosol, plastid	47.38	39.75
TraesCS1D01G157500.1	Wheat	cytosol	36.16	37.18
TraesCS5D01G003600.1	Wheat	cytosol	36.91	35.15
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.49	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS3D01G500500	EnsemblPlants:TraesCS3D01G500500.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr3D:+:589696125..589697427

Molecular Weight (calculated)

43361.9 Da

IEP (calculated)

6.076

GRAVY (calculated)

-0.052

Length

401 amino acids

Sequence
(BLAST)

001: MGSSNTLSSV REIRRSQRAD GPAAVLAIGT ANPANCVSQE EYPDYYFRVT KSQHLTDLKK QLKTFCEMTS TEKRYFHHTE ELLDAHPEFL CHDKPSLDTR
101: LSIAAAAAPE LAASAAAKAI AEWGRPATDI THLIVSTNSG AHAPGVDLRL ASLLGLRASV CRTMLNLNGC STGAASLRLA KDLAENNRGA RVLVACVELT
201: VINFRGPEEA YPHKLISQAA FGDGAGAVIV GADAVHPVEH TLFEMVSASQ TTIPATDGVL NMQLTEAGLD GHIFTRELIP LAAQHIEQCL MDAFQPFGIM
301: SDGTKWNDMF FVVHPGIRGI IDHIDGALRL DPGKLAASRT VLRDYGNMLG ATLIFVLDEQ RMRMEEDGER GEWGVMMGFG PGFTVETMVL HAVASNLHSK
401: N

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.