Factsheet for TraesCS6D01G278200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G298400.1	Wheat	cytosol	98.25	98.25
TraesCS6B01G327900.1	Wheat	cytosol	81.8	98.2
HORVU6Hr1G074060.2	Barley	cytosol	94.76	94.29
EER99419	Sorghum	cytosol	79.3	78.71
Zm00001d021562_P001	Maize	cytosol, mitochondrion	77.81	77.61
Zm00001d000438_P001	Maize	cytosol, mitochondrion	77.81	77.61
Os07t0271500-01	Rice	cytosol	70.57	70.4
TraesCS7D01G046500.1	Wheat	unclear	60.35	61.27
TraesCS6D01G197900.1	Wheat	cytosol	44.14	61.03
TraesCS2D01G016200.1	Wheat	cytosol	60.1	60.4
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	60.1	60.25
TraesCS3D01G500500.1	Wheat	cytosol	59.85	59.85
TraesCS2D01G051300.1	Wheat	cytosol	59.6	59.6
TraesCS7D01G047000.1	Wheat	cytosol, plastid	59.1	59.55
TraesCS7D01G046700.1	Wheat	cytosol, mitochondrion	58.6	59.49
TraesCS1D01G359600.1	Wheat	cytosol	57.36	58.38
TraesCS2D01G016100.1	Wheat	cytosol	55.86	56.85
TraesCS7D01G089300.1	Wheat	mitochondrion	55.11	55.67
TraesCS2D01G030600.1	Wheat	mitochondrion	52.87	54.92
TraesCS4D01G351300.1	Wheat	mitochondrion	53.87	54.27
TraesCS2D01G027800.1	Wheat	cytosol	28.18	53.55
TraesCS2D01G027900.2	Wheat	cytosol	50.87	51.78
TraesCS2D01G034500.1	Wheat	cytosol	50.62	51.39
TraesCS2D01G027700.1	Wheat	cytosol	50.37	51.27
TraesCS5D01G488600.1	Wheat	cytosol	48.63	49.37
TraesCS5D01G488700.1	Wheat	cytosol	48.63	49.37
TraesCS1D01G033600.1	Wheat	cytosol	48.13	48.37
TraesCS1D01G033800.1	Wheat	cytosol	47.63	47.99
TraesCS6D01G018500.1	Wheat	plastid	52.37	47.95
TraesCS2D01G530600.1	Wheat	cytosol, plastid	50.12	42.05
TraesCS1D01G157500.1	Wheat	cytosol	37.16	38.21
TraesCS5D01G003600.1	Wheat	cytosol	38.15	36.34
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.24	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813
GO:GO:0016740	GO:GO:0016747	GO:GO:0042802	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS6D01G278200	EnsemblPlants:TraesCS6D01G278200.1	TIGR:cd00831	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:-:386464645..386465948

Molecular Weight (calculated)

43254.0 Da

IEP (calculated)

6.233

GRAVY (calculated)

0.026

Length

401 amino acids

Sequence
(BLAST)

001: MGSVPAATPS VREIWRAQRA DGPAAVLAIG TANPAHCVPQ DEFPDFYFRA TNSDHLTALK GKFKRVFQKL GVEKRYLHHT EELLRAHPEF LDDEAASLDA
101: RLDIVATAVP ELAAEASKKA ISEWGRPAAD ITHLVVTTNS GAHIPGVDFR LIPLLGLRPS VRRTMLYLNG CFAGSAALRL AKDLAENNRG ARVLVVCAEL
201: TLMLFNGPKE GSFERLIHQG LFGDGAGAVV VGADPLSPVE HALFEMVSAA QTVIPDSGDA ITMHITKGGF GGNISTRDVP VFIGDNVERC LHDSLEPLGI
301: GAKWNDLFWA VHPGSSAILD RIDTVLQLEP EKLAASRRVL SDYGNMFGVT IIFVLDELRR RLREQEGAGG APEWGVVMTF GPGLTVETMV LHATGHMHAS
401: P

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.