Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G048400.1 | Wheat | cytosol | 98.99 | 99.24 |
| TraesCS2A01G035300.1 | Wheat | cytosol | 98.73 | 98.98 |
| TraesCS2D01G027700.1 | Wheat | cytosol | 97.47 | 97.72 |
| TraesCS2D01G027900.2 | Wheat | cytosol | 97.47 | 97.72 |
| TraesCS2D01G027800.1 | Wheat | cytosol | 49.62 | 92.89 |
| GSMUA_Achr6P16370_001 | Banana | cytosol, mitochondrion, plastid | 68.61 | 86.58 |
| KRH42776 | Soybean | cytosol | 54.68 | 84.71 |
| GSMUA_Achr6P10910_001 | Banana | cytosol, mitochondrion | 69.62 | 83.84 |
| TraesCS5D01G488700.1 | Wheat | cytosol | 83.8 | 83.8 |
| TraesCS5D01G488600.1 | Wheat | cytosol | 83.8 | 83.8 |
| VIT_14s0068g00930.t01 | Wine grape | cytosol | 83.29 | 83.72 |
| VIT_14s0068g00920.t01 | Wine grape | cytosol | 82.53 | 82.95 |
| PGSC0003DMT400076178 | Potato | cytosol | 81.52 | 82.78 |
| Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 81.52 | 82.78 |
| KRH42759 | Soybean | cytosol | 81.01 | 82.47 |
| CDX78547 | Canola | cytosol | 82.03 | 82.23 |
| KRH58872 | Soybean | cytosol | 80.76 | 82.22 |
| KRH42783 | Soybean | cytosol | 80.76 | 82.22 |
| KRH42758 | Soybean | cytosol | 80.76 | 82.22 |
| KRH42780 | Soybean | cytosol | 80.76 | 82.22 |
| KRH42778 | Soybean | cytosol | 80.76 | 82.22 |
| KRH42775 | Soybean | cytosol | 80.76 | 82.22 |
| CDX69618 | Canola | cytosol | 82.03 | 82.03 |
| VIT_05s0136g00260.t01 | Wine grape | cytosol | 80.76 | 82.01 |
| Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 80.76 | 82.01 |
| KRH42757 | Soybean | cytosol | 80.51 | 81.96 |
| CDX91090 | Canola | cytosol | 82.03 | 81.82 |
| CDX70528 | Canola | cytosol | 82.03 | 81.82 |
| GSMUA_Achr10P... | Banana | cytosol | 67.09 | 81.79 |
| CDY09836 | Canola | cytosol | 81.77 | 81.77 |
| Bra008792.1-P | Field mustard | cytosol | 81.77 | 81.77 |
| KRH42760 | Soybean | cytosol | 80.25 | 81.7 |
| KRH37579 | Soybean | cytosol | 80.25 | 81.7 |
| KRH75544 | Soybean | cytosol | 80.25 | 81.7 |
| PGSC0003DMT400049165 | Potato | cytosol, mitochondrion | 80.25 | 81.49 |
| KRH71115 | Soybean | cytosol | 80.0 | 81.44 |
| KRG94730 | Soybean | cytosol | 80.25 | 81.07 |
| Bra006224.1-P | Field mustard | cytosol | 81.27 | 81.06 |
| AT5G13930.1 | Thale cress | cytosol | 81.01 | 81.01 |
| Bra023441.1-P | Field mustard | cytosol | 80.51 | 80.71 |
| TraesCS2D01G530600.1 | Wheat | cytosol, plastid | 97.47 | 80.54 |
| KRH77699 | Soybean | endoplasmic reticulum | 78.23 | 79.43 |
| TraesCS1D01G033600.1 | Wheat | cytosol | 80.0 | 79.2 |
| KRH27737 | Soybean | cytosol | 77.72 | 78.92 |
| TraesCS1D01G033800.1 | Wheat | cytosol | 79.49 | 78.89 |
| CDY51056 | Canola | cytosol | 77.97 | 78.17 |
| Bra036307.1-P | Field mustard | cytosol | 77.47 | 77.86 |
| Bra020688.1-P | Field mustard | cytosol | 77.47 | 77.67 |
| CDY05664 | Canola | cytosol | 77.22 | 77.41 |
| PGSC0003DMT400076179 | Potato | cytosol | 73.42 | 76.52 |
| CDY07114 | Canola | cytosol | 76.46 | 73.66 |
| GSMUA_Achr10P... | Banana | mitochondrion | 63.04 | 72.59 |
| CDY05666 | Canola | mitochondrion | 68.86 | 65.07 |
| TraesCS6D01G197900.1 | Wheat | cytosol | 39.75 | 54.14 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 50.63 | 50.76 |
| TraesCS6D01G278200.1 | Wheat | cytosol | 51.39 | 50.62 |
| TraesCS2D01G022700.1 | Wheat | cytosol, mitochondrion, plastid | 50.38 | 49.75 |
| TraesCS3D01G500500.1 | Wheat | cytosol | 48.61 | 47.88 |
| TraesCS7D01G046500.1 | Wheat | unclear | 47.85 | 47.85 |
| TraesCS2D01G051300.1 | Wheat | cytosol | 48.35 | 47.63 |
| TraesCS2D01G016200.1 | Wheat | cytosol | 47.09 | 46.62 |
| TraesCS7D01G047000.1 | Wheat | cytosol, plastid | 46.84 | 46.48 |
| TraesCS2D01G016100.1 | Wheat | cytosol | 46.08 | 46.19 |
| TraesCS7D01G046700.1 | Wheat | cytosol, mitochondrion | 46.08 | 46.08 |
| TraesCS2D01G030600.1 | Wheat | mitochondrion | 44.81 | 45.85 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 45.82 | 45.48 |
| TraesCS7D01G089300.1 | Wheat | mitochondrion | 45.57 | 45.34 |
| TraesCS6D01G018500.1 | Wheat | plastid | 46.84 | 42.24 |
| TraesCS1D01G157500.1 | Wheat | cytosol | 35.95 | 36.41 |
| TraesCS5D01G003600.1 | Wheat | cytosol | 36.96 | 34.68 |
Protein Annotations
| KEGG:00941+2.3.1.74 | Gene3D:3.40.47.10 | MapMan:9.2.2.1.1.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_AS | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 |
| ScanProsite:PS00441 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF44 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like |
| EnsemblPlantsGene:TraesCS2D01G034500 | EnsemblPlants:TraesCS2D01G034500.1 | TIGR:cd00831 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2D:+:13421444..13422739
Molecular Weight (calculated)
43301.4 Da
IEP (calculated)
6.439
GRAVY (calculated)
-0.125
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATMTVEE VRKAQRAEGP ATVLAIGTAT PANCVYQADY PDYYFKITKS DHMADLKDKF KRMCEKSQIR KRYMHLTEEI LQDNPNMCAY MAPSLDARQD
101: IVVVEVPKLG KAAAQKAIKE WGQPRSKITH LVFCTTSGVD MPGADYQLTK MLGLRPSVKR LMMYQQGCFA GGTVLRLAKD LAENNRGARV LVVCSEITAV
201: TFRGPHESHL DSLVGQALFG DGAAAVIVGA DPDESVERPL FQLVSASQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIERALEDA FKPLGIDDWN
301: SVFWMAHPGG PAILDMVEAK VNLNKERMRA TRHVLSEYGN MSSACVLFIM DEMRKRSAED GHTTTGEGMD WGVLFGFGPG LTVETVVLHS VPITA
101: IVVVEVPKLG KAAAQKAIKE WGQPRSKITH LVFCTTSGVD MPGADYQLTK MLGLRPSVKR LMMYQQGCFA GGTVLRLAKD LAENNRGARV LVVCSEITAV
201: TFRGPHESHL DSLVGQALFG DGAAAVIVGA DPDESVERPL FQLVSASQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIERALEDA FKPLGIDDWN
301: SVFWMAHPGG PAILDMVEAK VNLNKERMRA TRHVLSEYGN MSSACVLFIM DEMRKRSAED GHTTTGEGMD WGVLFGFGPG LTVETVVLHS VPITA
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.