Factsheet for Solyc09g091510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g083860.2.1
Solyc02g085020.2.1
Solyc05g010310.2.1
Solyc05g010320.2.1
Solyc11g013110.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	Solyc02g083860.2.1	AT3G51240.1	10536025
AT5G13930.1	Solyc05g010310.2.1	AT3G55120.1	10536025
AT5G13930.1	Solyc05g010320.2.1	AT3G55120.1	10536025
AT5G13930.1	Solyc11g013110.1.1	AT5G08640.1	18467451
AT5G13930.1	Solyc11g013110.1.1	AT5G08640.1	21669202
AT5G13930.1	Solyc02g085020.2.1	AT5G42800.1	10536025
AT5G13930.1	Solyc02g085020.2.1	AT5G42800.1	21669202
AT5G13930.1	Solyc11g013110.1.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076178	Potato	cytosol	99.23	99.23
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	92.03	92.03
PGSC0003DMT400076179	Potato	cytosol	88.43	90.77
VIT_14s0068g00920.t01	Wine grape	cytosol	89.46	88.55
VIT_14s0068g00930.t01	Wine grape	cytosol	89.2	88.3
KRG94730	Soybean	cytosol	86.89	86.44
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	68.89	85.62
CDX78547	Canola	cytosol	85.6	84.52
CDX70528	Canola	cytosol	85.6	84.09
CDX69618	Canola	cytosol	85.09	83.8
CDY09836	Canola	cytosol	84.83	83.54
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	70.44	83.54
Bra006224.1-P	Field mustard	cytosol	84.83	83.33
EES09858	Sorghum	cytosol	85.86	83.29
AT5G13930.1	Thale cress	cytosol	84.58	83.29
CDX91090	Canola	cytosol	84.58	83.08
Bra008792.1-P	Field mustard	cytosol	84.32	83.04
TraesCS2D01G027700.1	Wheat	cytosol	84.06	82.99
EES09865	Sorghum	cytosol	85.35	82.79
EES09864	Sorghum	cytosol	85.09	82.75
EES08604	Sorghum	cytosol	85.09	82.54
EES09859	Sorghum	cytosol	85.09	82.54
EES09860	Sorghum	cytosol	85.09	82.54
KXG29016	Sorghum	cytosol	85.09	82.54
EES09863	Sorghum	cytosol	85.09	82.54
Bra023441.1-P	Field mustard	cytosol	83.55	82.49
TraesCS2B01G038700.1	Wheat	cytosol	83.55	82.49
TraesCS2A01G035300.1	Wheat	cytosol	83.55	82.49
TraesCS2A01G025700.1	Wheat	cytosol, golgi	83.55	82.49
TraesCS2A01G025600.1	Wheat	cytosol	83.55	82.49
TraesCS2A01G527700.2	Wheat	cytosol	84.32	82.41
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	84.32	82.41
GSMUA_Achr10P...	Banana	cytosol	68.64	82.41
TraesCS2D01G027900.2	Wheat	cytosol	83.29	82.23
HORVU2Hr1G116390.2	Barley	cytosol	84.06	82.16
TraesCS2B01G558400.1	Wheat	cytosol	84.06	82.16
EES09862	Sorghum	cytosol	84.58	82.04
Zm00001d052673_P001	Maize	cytosol	84.32	82.0
TraesCS2D01G027800.1	Wheat	cytosol	44.47	81.99
HORVU2Hr1G005220.3	Barley	cytosol	83.03	81.77
TraesCS2B01G048400.1	Wheat	cytosol	82.78	81.73
TraesCS2A01G025500.1	Wheat	cytosol	82.78	81.73
TraesCS2D01G034500.1	Wheat	cytosol	82.78	81.52
Zm00001d007403_P001	Maize	cytosol	83.29	80.8
Bra020688.1-P	Field mustard	cytosol	81.23	80.2
CDY51056	Canola	cytosol	80.98	79.95
TraesCS2B01G038600.1	Wheat	cytosol	74.29	79.83
Bra036307.1-P	Field mustard	cytosol	80.21	79.39
TraesCS2B01G613100.1	Wheat	cytosol	81.23	79.2
CDY05664	Canola	cytosol	79.95	78.93
TraesCS5D01G488700.1	Wheat	cytosol	77.12	75.95
TraesCS5D01G488600.1	Wheat	cytosol	77.12	75.95
HORVU2Hr1G004170.4	Barley	plastid	83.8	75.29
EES14634	Sorghum	cytosol	76.86	75.13
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	76.09	74.94
TraesCS1B01G041000.1	Wheat	cytosol	75.84	74.68
TraesCS1A01G032100.1	Wheat	cytosol	75.84	74.68
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	75.58	74.43
CDY07114	Canola	cytosol	78.41	74.39
TraesCS1B01G040100.1	Wheat	cytosol	75.06	73.92
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	76.09	73.63
TraesCS1A01G032300.1	Wheat	cytosol	75.32	73.62
TraesCS1D01G033600.1	Wheat	cytosol	75.32	73.43
TraesCS1B01G040500.1	Wheat	cytosol	75.32	73.43
HORVU1Hr1G089540.1	Barley	mitochondrion	75.06	73.18
TraesCS1D01G033800.1	Wheat	cytosol	74.81	73.12
GSMUA_Achr10P...	Banana	mitochondrion	64.01	72.59
HORVU1Hr1G004830.1	Barley	cytosol	73.78	72.29
Os07t0214900-00	Rice	cytosol	73.26	70.72
TraesCS2D01G530600.1	Wheat	cytosol, plastid	84.32	68.62
Solyc05g053170.2.1	Tomato	cytosol	68.12	67.6
CDY05666	Canola	mitochondrion	70.95	66.03
Solyc12g098090.1.1	Tomato	cytosol	73.26	65.07
Solyc01g111070.2.1	Tomato	cytosol	44.22	44.91
Solyc01g090600.2.1	Tomato	cytosol, extracellular, mitochondrion, peroxisome	36.5	39.66

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813
GO:GO:0016210	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4CWH7
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF43
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc09g091510.2	EnsemblPlants:Solyc09g091510.2.1	InterPro:Thiolase-like	UniParc:UPI000276B5A3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:70775197..70777348

Molecular Weight (calculated)

42471.6 Da

IEP (calculated)

6.711

GRAVY (calculated)

-0.049

Length

389 amino acids

Sequence
(BLAST)

001: MVTVEEYRKA QRAEGPATIL AIGTSTPSNC VDQSTYPDYY FRITNSEHKT ELKEKFKRMC DKSMIKKRYM HLTEEILKEN PNMCAYMAPS LDARQDIVVV
101: EVPKLGKEAA QKAIKEWGQP KSKITHLVFC TTSGVDMPGC DYQLAKLLGL RPSVKRLMMY QQGCFAGGTV LRLAKDLAEN NKGARVLVVC SEITAVTFRG
201: PSESHLDSLV GQALFGDGAA AIIIGSDPII GVERPLFELV SAAQTLVPDS EGAIDGHLRE VGLTFHLLKD VPGLISKNIE KSLLEAFQPL GISDWNSLFW
301: IAHPGGPAIL DQVELKLGLK PEKLRATREV LSNYGNMSSA CVLFILDEMR KASTKEGLGT TGEGLEWGVL FGFGPGLTVE TVVLHSVAA

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.