Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069814 | Potato | cytosol | 96.43 | 96.43 |
| Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 67.6 | 68.12 |
| Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 66.33 | 66.84 |
| KRH18039 | Soybean | cytosol | 43.11 | 53.14 |
| Solyc12g098090.1.1 | Tomato | cytosol | 57.4 | 51.37 |
| Solyc01g111070.2.1 | Tomato | cytosol | 38.27 | 39.16 |
| Solyc01g090600.2.1 | Tomato | cytosol, extracellular, mitochondrion, peroxisome | 32.65 | 35.75 |
Protein Annotations
| KEGG:00941+2.3.1.74 | Gene3D:3.40.47.10 | MapMan:9.2.2.1.1.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_AS | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | UniProt:K4C1Z7 | PFAM:PF00195 | PFAM:PF02797 |
| PIRSF:PIRSF000451 | ScanProsite:PS00441 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF44 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 |
| EnsemblPlantsGene:Solyc05g053170.2 | EnsemblPlants:Solyc05g053170.2.1 | InterPro:Thiolase-like | UniParc:UPI00018C4769 | SEG:seg | : |
Description
No Description!
Coordinates
chr5:+:63299967..63303486
Molecular Weight (calculated)
43271.6 Da
IEP (calculated)
7.476
GRAVY (calculated)
-0.058
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLENGQKIG RVHERAEGPA KILAIGTATP FHWVDQTSYP DYYFKVTNNE HLVDLKEKFR RICSRTMIRK RHMLLTEEIL KKNPNLCSYN GPSLDIRQDI
101: LVSEIPKLGK EAALRAIDEW AQPKSNITHL VFCTRSGVDM PGADYQLINL LGLSPSVQRF MMYQQGCFAG GTMLRLAKDL AENNKGARVL VVCAESSAIG
201: FRGPSEAYPD NLIAQALFGD GAVAVIIGSD PKMGLERPVF EIVSAGQTFV PNGDCHLALH LREMGLTFHC TRDVPPAIAK NVESCLIKAF EPLGISDWNS
301: VFWILHPGGN AIVDQVENIL GLEPDRLRAT RNILREYGNL SSACVLFILD EIRKKSARDG LKTTGDGLDL GVLLSFGPGL TIETVVLRSM PI
101: LVSEIPKLGK EAALRAIDEW AQPKSNITHL VFCTRSGVDM PGADYQLINL LGLSPSVQRF MMYQQGCFAG GTMLRLAKDL AENNKGARVL VVCAESSAIG
201: FRGPSEAYPD NLIAQALFGD GAVAVIIGSD PKMGLERPVF EIVSAGQTFV PNGDCHLALH LREMGLTFHC TRDVPPAIAK NVESCLIKAF EPLGISDWNS
301: VFWILHPGGN AIVDQVENIL GLEPDRLRAT RNILREYGNL SSACVLFILD EIRKKSARDG LKTTGDGLDL GVLLSFGPGL TIETVVLRSM PI
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.