Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400043464 | Potato | cytosol | 76.94 | 83.42 |
| Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 65.07 | 73.26 |
| Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 63.93 | 71.98 |
| Solyc05g053170.2.1 | Tomato | cytosol | 51.37 | 57.4 |
| Solyc01g111070.2.1 | Tomato | cytosol | 36.53 | 41.78 |
| Solyc01g090600.2.1 | Tomato | cytosol, extracellular, mitochondrion, peroxisome | 29.68 | 36.31 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:9.2.2.1.1.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| InterPro:IPR016039 | UniProt:K4DHI3 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 |
| PANTHER:PTHR11877:SF14 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | EnsemblPlantsGene:Solyc12g098090.1 | EnsemblPlants:Solyc12g098090.1.1 | InterPro:Thiolase-like |
| UniParc:UPI000276A058 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:65743380..65745241
Molecular Weight (calculated)
48285.0 Da
IEP (calculated)
8.361
GRAVY (calculated)
-0.064
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKCLCSNLP PSAKIVTIEE FHKAQRAEGL ANVLAIGTAN PSNCIDQSTY PDYFFRITNS EHKSELKRKF KQMCAKTMIK KRYLHLTEEI LKKNPNICDY
101: NTPSFDAKQK ITIIEVPKLG QEAAQKAIKE WGQPISKITH LVFCTTSGVD MPGADSQLTK LLGLDPSVKR FMLYQQGCSG GAAVLRLAKD LAENNKKARV
201: LVVCSELINL MSFQGPRDTD LDVLVGQAFS SDGASAVIIG SDPIIPIERP LFELVFTTQT LLPNSESAIY SNLSEAGLII HIHKEVPMLI STNIEKILLE
301: GFQPLGISDW NSIFWVAHPG GRAISDQIEL KLGLKPEKLK ATRNVLSGYG NMGCATILFV LDEMRKASIS EGLISTGEGL EWGVLCCFGP GLTMEAVVLR
401: SCNLIMSEFV DIAPMKYGKC QTLGTTRRGV RNRNKENR
101: NTPSFDAKQK ITIIEVPKLG QEAAQKAIKE WGQPISKITH LVFCTTSGVD MPGADSQLTK LLGLDPSVKR FMLYQQGCSG GAAVLRLAKD LAENNKKARV
201: LVVCSELINL MSFQGPRDTD LDVLVGQAFS SDGASAVIIG SDPIIPIERP LFELVFTTQT LLPNSESAIY SNLSEAGLII HIHKEVPMLI STNIEKILLE
301: GFQPLGISDW NSIFWVAHPG GRAISDQIEL KLGLKPEKLK ATRNVLSGYG NMGCATILFV LDEMRKASIS EGLISTGEGL EWGVLCCFGP GLTMEAVVLR
401: SCNLIMSEFV DIAPMKYGKC QTLGTTRRGV RNRNKENR
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.