Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007403_P001 | Maize | cytosol | 97.25 | 97.01 |
| EES09865 | Sorghum | cytosol | 93.75 | 93.52 |
| KXG29016 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09863 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09862 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09860 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09859 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09858 | Sorghum | cytosol | 93.75 | 93.52 |
| EES08604 | Sorghum | cytosol | 93.75 | 93.52 |
| EES09864 | Sorghum | cytosol | 93.25 | 93.25 |
| Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 91.25 | 91.71 |
| GSMUA_Achr6P16370_001 | Banana | cytosol, mitochondrion, plastid | 69.0 | 88.18 |
| KRH42776 | Soybean | cytosol | 54.5 | 85.49 |
| GSMUA_Achr6P10910_001 | Banana | cytosol, mitochondrion | 69.75 | 85.06 |
| VIT_14s0068g00930.t01 | Wine grape | cytosol | 83.25 | 84.73 |
| GSMUA_Achr10P... | Banana | cytosol | 68.5 | 84.57 |
| KRH42759 | Soybean | cytosol | 82.0 | 84.54 |
| VIT_14s0068g00920.t01 | Wine grape | cytosol | 83.0 | 84.48 |
| Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 82.0 | 84.32 |
| PGSC0003DMT400076178 | Potato | cytosol | 82.0 | 84.32 |
| KRH42783 | Soybean | cytosol | 81.75 | 84.28 |
| KRH42775 | Soybean | cytosol | 81.75 | 84.28 |
| KRH42758 | Soybean | cytosol | 81.75 | 84.28 |
| KRH42778 | Soybean | cytosol | 81.75 | 84.28 |
| KRH42780 | Soybean | cytosol | 81.75 | 84.28 |
| KRH58872 | Soybean | cytosol | 81.75 | 84.28 |
| CDX69618 | Canola | cytosol | 83.0 | 84.05 |
| KRH42757 | Soybean | cytosol | 81.5 | 84.02 |
| CDX91090 | Canola | cytosol | 83.0 | 83.84 |
| Bra008792.1-P | Field mustard | cytosol | 82.75 | 83.8 |
| KRH42760 | Soybean | cytosol | 81.25 | 83.76 |
| Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 81.25 | 83.55 |
| VIT_05s0136g00260.t01 | Wine grape | cytosol | 81.25 | 83.55 |
| CDX78547 | Canola | cytosol | 82.25 | 83.5 |
| AT5G13930.1 | Thale cress | cytosol | 82.25 | 83.29 |
| CDY09836 | Canola | cytosol | 82.25 | 83.29 |
| PGSC0003DMT400049165 | Potato | cytosol, mitochondrion | 81.0 | 83.29 |
| KRH75544 | Soybean | cytosol | 80.75 | 83.25 |
| KRG94730 | Soybean | cytosol | 81.25 | 83.12 |
| CDX70528 | Canola | cytosol | 82.25 | 83.08 |
| KRH37579 | Soybean | cytosol | 80.5 | 82.99 |
| KRH71115 | Soybean | cytosol | 80.25 | 82.73 |
| Bra023441.1-P | Field mustard | cytosol | 81.25 | 82.49 |
| Bra006224.1-P | Field mustard | cytosol | 81.5 | 82.32 |
| KRH27737 | Soybean | cytosol | 78.75 | 80.98 |
| KRH77699 | Soybean | endoplasmic reticulum | 78.5 | 80.72 |
| Bra036307.1-P | Field mustard | cytosol | 78.25 | 79.64 |
| Bra020688.1-P | Field mustard | cytosol | 77.75 | 78.93 |
| CDY51056 | Canola | cytosol | 77.5 | 78.68 |
| CDY05664 | Canola | cytosol | 77.5 | 78.68 |
| PGSC0003DMT400076179 | Potato | cytosol | 74.0 | 78.1 |
| GSMUA_Achr10P... | Banana | mitochondrion | 64.5 | 75.22 |
| CDY07114 | Canola | cytosol | 77.0 | 75.12 |
| CDY05666 | Canola | mitochondrion | 67.5 | 64.59 |
| Zm00001d000438_P001 | Maize | cytosol, mitochondrion | 54.25 | 53.98 |
| Zm00001d021562_P001 | Maize | cytosol, mitochondrion | 54.25 | 53.98 |
| Zm00001d040483_P001 | Maize | cytosol | 38.0 | 51.18 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 49.75 | 50.13 |
| Zm00001d040497_P001 | Maize | mitochondrion | 49.5 | 50.0 |
| Zm00001d040479_P001 | Maize | mitochondrion | 49.75 | 50.0 |
| Zm00001d007717_P001 | Maize | mitochondrion, plastid | 41.0 | 47.13 |
| Zm00001d052676_P001 | Maize | plastid | 50.0 | 42.37 |
| Zm00001d007400_P001 | Maize | cytosol | 40.25 | 38.33 |
| Zm00001d019478_P001 | Maize | cytosol | 38.75 | 37.17 |
| Zm00001d032662_P001 | Maize | plastid | 34.25 | 35.13 |
| Zm00001d013991_P001 | Maize | mitochondrion | 35.0 | 33.25 |
| Zm00001d052675_P002 | Maize | plastid | 46.5 | 25.24 |
| Zm00001d052916_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 35.5 | 20.94 |
Protein Annotations
| KEGG:00941+2.3.1.74 | EntrezGene:100274415 | Gene3D:3.40.47.10 | MapMan:9.2.2.1.1.1 | ProteinID:AAW56961.1 | ProteinID:AAW56962.1 |
| ProteinID:AAW56964.1 | ProteinID:AQK57683.1 | EMBL:BT061979 | ProteinID:CAA42764.1 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_AS |
| InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009813 | GO:GO:0016210 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 |
| UniProt:P24825 | PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | ScanProsite:PS00441 | PANTHER:PTHR11877 |
| PANTHER:PTHR11877:SF44 | InterPro:Polyketide_synthase_type-III | UniProt:Q4QWZ6 | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI00001278F7 |
| EnsemblPlantsGene:Zm00001d052673 | EnsemblPlants:Zm00001d052673_P001 | EnsemblPlants:Zm00001d052673_T001 | SEG:seg | : | : |
Description
colorless2Chalcone synthase C2
Coordinates
chr4:+:196893203..196896503
Molecular Weight (calculated)
43198.1 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.039
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGATVTVEE VRKAQRATGP ATVLAIGTAT PANCVYQADY PDYYFRITKS EHLTDLKEKF KRMCDKSMIR KRYMHLTEEF LAENPSMCAY MAPSLDARQD
101: VVVVEVPKLG KAAAQKAIKE WGQPKSRITH LVFCTTSGVD MPGADYQLTK ALGLRPSVNR LMMYQQGCFA GGTVLRVAKD LAENNRGARV LVVCSEITAV
201: TFRGPSESHL DSLVGQALFG DGAAAVVVGA DPDDRVERPL FQLVSAAQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIGRALDDA FKPLGISDWN
301: SIFWVAHPGG PAILDQVEAK VGLDKARMRA TRHVLSEYGN MSSACVLFIL DEMRKRSAED GQATTGEGLD WGVLFGFGPG LTVETVVLHS VPITTGAATA
101: VVVVEVPKLG KAAAQKAIKE WGQPKSRITH LVFCTTSGVD MPGADYQLTK ALGLRPSVNR LMMYQQGCFA GGTVLRVAKD LAENNRGARV LVVCSEITAV
201: TFRGPSESHL DSLVGQALFG DGAAAVVVGA DPDDRVERPL FQLVSAAQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIGRALDDA FKPLGISDWN
301: SIFWVAHPGG PAILDQVEAK VGLDKARMRA TRHVLSEYGN MSSACVLFIL DEMRKRSAED GQATTGEGLD WGVLFGFGPG LTVETVVLHS VPITTGAATA
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.