Factsheet for Zm00001d052676_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040483_P001	Maize	cytosol	39.83	63.3
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	9.96	61.84
Zm00001d040479_P001	Maize	mitochondrion	50.0	59.3
Zm00001d040497_P001	Maize	mitochondrion	49.15	58.59
Zm00001d000438_P001	Maize	cytosol, mitochondrion	48.52	56.97
Zm00001d021562_P001	Maize	cytosol, mitochondrion	48.52	56.97
Zm00001d007717_P001	Maize	mitochondrion, plastid	38.77	52.59
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	43.22	51.39
Zm00001d007403_P001	Maize	cytosol	42.58	50.12
Zm00001d052673_P001	Maize	cytosol	42.37	50.0
Zm00001d007400_P001	Maize	cytosol	41.95	47.14
Zm00001d032662_P001	Maize	plastid	30.51	36.92
Zm00001d019478_P001	Maize	cytosol	30.93	35.01
Zm00001d013991_P001	Maize	mitochondrion	30.93	34.68
Zm00001d052675_P002	Maize	plastid	47.03	30.12
Zm00001d052916_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	36.02	25.07
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	1.91	0.48

Protein Annotations

EntrezGene:103654409	Gene3D:3.40.47.10	MapMan:50.2.3	ProteinID:AQK57702.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K7UML1	PFAM:PF00195	PFAM:PF02797
PANTHER:PTHR11877	PANTHER:PTHR11877:SF29	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	SignalP:SignalP-noTM	InterPro:Thiolase-like
UniParc:UPI000221DFF0	EnsemblPlantsGene:Zm00001d052676	EnsemblPlants:Zm00001d052676_P001	EnsemblPlants:Zm00001d052676_T001	SEG:seg	:

Description

Type III polyketide synthase B

Coordinates

chr4:+:196979630..196981205

Molecular Weight (calculated)

49695.7 Da

IEP (calculated)

8.741

GRAVY (calculated)

0.016

Length

472 amino acids

Sequence
(BLAST)

001: MSHTTSLLLS WSWSLMTMPT SSFTSTTPPS IQLGRTTPSG VPSSRPLVAV GRRINRIRCS ATYTLAPSRE STTTTTTAVG EARRAQGAAV LALGTANPAA
101: TCLPQTEYAD WYFRATKRDH LTKLKAKMKK ICHNSGIRKR YFHHTEDTLL EHPELVDGAL PSLDARQSIL GSAVPELAAS AAARAIAEWG RPAADITHLV
201: FATNSGAHMP GADLRLASLL GLRPSAQRTA LYLTGCHAGS AALRVAKDVA ENSRGARVLV ACGDLSLVKF RAPHEDRPET LVLQALFGDG AGAAIVGAAS
301: DEMYGSGAES CPLFEMVSAS QTVVPNSEDA VAGQLGQDGL VFSPSPRMPA LVREHIERCL ADAVGPLGLL GGGGGGGDWN DLFWAVHPGG PLRSLTLQAT
401: LALAPSKLAA SRHVLSEYGN MSGASVIFVL DELRRRCGML DGDFGVMLGF GPGFTVETMV LRAAKAATKK VF

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.