Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G197900.1 | Wheat | cytosol | 72.39 | 74.14 |
| Zm00001d040497_P001 | Maize | mitochondrion | 95.62 | 71.72 |
| Zm00001d040479_P001 | Maize | mitochondrion | 95.29 | 71.11 |
| Zm00001d007717_P001 | Maize | mitochondrion, plastid | 64.65 | 55.17 |
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 73.06 | 54.52 |
| HORVU6Hr1G055000.1 | Barley | cytosol, mitochondrion | 72.39 | 54.29 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 68.69 | 50.87 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 56.9 | 50.3 |
| TraesCS4A01G292500.1 | Wheat | cytosol | 67.34 | 50.25 |
| HORVU4Hr1G003250.1 | Barley | cytosol | 69.7 | 49.4 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 63.97 | 47.98 |
| EES15556 | Sorghum | cytosol, mitochondrion | 57.91 | 45.14 |
| OQU86627 | Sorghum | mitochondrion | 56.23 | 44.89 |
| Zm00001d000438_P001 | Maize | cytosol, mitochondrion | 59.26 | 43.78 |
| Zm00001d021562_P001 | Maize | cytosol, mitochondrion | 59.26 | 43.78 |
| Zm00001d052676_P001 | Maize | plastid | 63.3 | 39.83 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 52.19 | 39.04 |
| Zm00001d007403_P001 | Maize | cytosol | 51.52 | 38.15 |
| Zm00001d052673_P001 | Maize | cytosol | 51.18 | 38.0 |
| Zm00001d007400_P001 | Maize | cytosol | 51.52 | 36.43 |
| Zm00001d032662_P001 | Maize | plastid | 42.76 | 32.56 |
| Zm00001d013991_P001 | Maize | mitochondrion | 43.1 | 30.4 |
| Zm00001d019478_P001 | Maize | cytosol | 39.73 | 28.3 |
| Zm00001d052675_P002 | Maize | plastid | 57.58 | 23.2 |
| Zm00001d052916_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 51.18 | 22.42 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.36 | 0.37 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | UniProt:A0A1D6MR15 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | InterPro:IPR016039 | ProteinID:ONM31441.1 | PFAM:PF00195 | PFAM:PF02797 | PANTHER:PTHR11877 |
| PANTHER:PTHR11877:SF29 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI0008450547 | EnsemblPlantsGene:Zm00001d040483 |
| EnsemblPlants:Zm00001d040483_P001 | EnsemblPlants:Zm00001d040483_T001 | SEG:seg | : | : | : |
Description
Type III polyketide synthase B
Coordinates
chr3:-:46196702..46197595
Molecular Weight (calculated)
31855.5 Da
IEP (calculated)
5.165
GRAVY (calculated)
0.118
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLHERQDI MASVVPELAA AAAVDAIAEW GRPATEITHL VVTTYSGAHM PGVDWLVASL LGLRPTVHRT MLYMNGCSSG CAALRLAKDM AENNRGARVL
101: VACAEVTLTL FRAPHEAHVD TLILQSLFGD GAGAVIVGAD PVSVEEPDFE MLSASQTMIP ESKHVAAGQL CEDGLHFHPS REIPSLVREN IEQCMVDALS
201: LLGIGGSWND LFWAVHPGGR AVLDSVEAGL RLEPHKLEAS RRVLSEYGNM SGPSVIFVLD ELRRQQERKG MGVILGLGPG VSVETIVLQA TDSQKKL
101: VACAEVTLTL FRAPHEAHVD TLILQSLFGD GAGAVIVGAD PVSVEEPDFE MLSASQTMIP ESKHVAAGQL CEDGLHFHPS REIPSLVREN IEQCMVDALS
201: LLGIGGSWND LFWAVHPGGR AVLDSVEAGL RLEPHKLEAS RRVLSEYGNM SGPSVIFVLD ELRRQQERKG MGVILGLGPG VSVETIVLQA TDSQKKL
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.