Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G215600.1 | Wheat | mitochondrion | 96.13 | 81.16 |
| HORVU6Hr1G055000.1 | Barley | cytosol, mitochondrion | 92.56 | 78.54 |
| TraesCS6D01G197900.1 | Wheat | cytosol | 66.07 | 76.55 |
| Os11t0529125-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 15.48 | 68.42 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 77.08 | 64.59 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 71.43 | 60.61 |
| Zm00001d007717_P001 | Maize | mitochondrion, plastid | 60.42 | 58.33 |
| Zm00001d040497_P001 | Maize | mitochondrion | 68.15 | 57.83 |
| Zm00001d040479_P001 | Maize | mitochondrion | 67.56 | 57.04 |
| Zm00001d040483_P001 | Maize | cytosol | 50.3 | 56.9 |
| EES15556 | Sorghum | cytosol, mitochondrion | 57.44 | 50.66 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 49.4 | 50.46 |
| TraesCS6B01G327900.1 | Wheat | cytosol | 49.11 | 49.4 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 42.86 | 48.16 |
| OQU86627 | Sorghum | mitochondrion | 52.08 | 47.04 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 55.95 | 46.88 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 54.17 | 46.79 |
| TraesCS2B01G019200.1 | Wheat | cytosol | 53.87 | 45.59 |
| TraesCS2B01G007000.1 | Wheat | cytosol | 53.87 | 45.25 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 51.49 | 43.91 |
| TraesCS2B01G048400.1 | Wheat | cytosol | 51.49 | 43.91 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 50.0 | 43.52 |
| TraesCS2B01G558400.1 | Wheat | cytosol | 51.49 | 43.47 |
| TraesCS2B01G613100.1 | Wheat | cytosol | 51.19 | 43.11 |
| TraesCS2B01G038600.1 | Wheat | cytosol | 45.54 | 42.27 |
| TraesCS2B01G006800.1 | Wheat | cytosol | 46.13 | 41.67 |
| TraesCS2B01G006700.1 | Wheat | cytosol | 48.51 | 41.37 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 49.11 | 41.04 |
| TraesCS1B01G040100.1 | Wheat | cytosol | 47.92 | 40.76 |
| TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 47.92 | 40.76 |
| TraesCS4B01G357800.1 | Wheat | cytosol | 36.01 | 40.6 |
| TraesCS1B01G040500.1 | Wheat | cytosol | 48.21 | 40.6 |
| TraesCS1B01G041000.1 | Wheat | cytosol | 47.62 | 40.51 |
| TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 47.62 | 40.51 |
| TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 48.21 | 40.3 |
| TraesCS2B01G006000.1 | Wheat | cytosol | 47.02 | 40.1 |
| TraesCS7B01G371700.1 | Wheat | plastid | 50.6 | 38.72 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 47.32 | 38.69 |
| TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 48.81 | 35.5 |
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 25.0 | 34.71 |
| TraesCS4B01G357700.1 | Wheat | mitochondrion | 24.11 | 34.18 |
| TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 38.39 | 33.16 |
| TraesCS1B01G176300.1 | Wheat | cytosol | 38.39 | 33.08 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 37.2 | 29.83 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.98 | 0.53 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF29 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6B01G245200 | EnsemblPlants:TraesCS6B01G245200.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:437800440..437801560
Molecular Weight (calculated)
36227.3 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.074
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLGNLTAS PTAAIIRKMW QAQRADGPAS VLATGTTNPA NCMRQDEYAD YYFRVTQKQH LTKLKSKLNR ICDRSAIKKR YFHHTEELLQ HHPEFIDRTL
101: TSLDARMDIA ATPVPDLAAA AAGKAIAEWG RPAADITHLV VSTYSGAHMP GVDLRLASRL GLDPSVRRTM LYLNGCSSGS AALRVAKDIA ENNRGARVLV
201: ACAELTLILF RAPDEAHVDT IIMQALYGDG AAAVIVGAEP DASAERPIFE MVAASQSVIP ESTHGAVGRL REDGLVFNPS FEMPALIREN IEQCMADAVG
301: PLGLSGGWND LFWAVHPGGR AILDSVEAGS SWSQRS
101: TSLDARMDIA ATPVPDLAAA AAGKAIAEWG RPAADITHLV VSTYSGAHMP GVDLRLASRL GLDPSVRRTM LYLNGCSSGS AALRVAKDIA ENNRGARVLV
201: ACAELTLILF RAPDEAHVDT IIMQALYGDG AAAVIVGAEP DASAERPIFE MVAASQSVIP ESTHGAVGRL REDGLVFNPS FEMPALIREN IEQCMADAVG
301: PLGLSGGWND LFWAVHPGGR AILDSVEAGS SWSQRS
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.