Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G015500.1 | Wheat | cytosol, plastid | 96.11 | 96.81 |
HORVU6Hr1G003020.2 | Barley | cytosol | 92.94 | 92.49 |
TraesCS6D01G018500.1 | Wheat | plastid | 94.4 | 88.58 |
TraesCS6B01G022300.1 | Wheat | cytosol | 84.67 | 86.57 |
TraesCS4B01G357800.1 | Wheat | cytosol | 60.58 | 83.56 |
TraesCS4B01G357600.1 | Wheat | mitochondrion | 48.66 | 82.64 |
TraesCS4B01G357700.1 | Wheat | mitochondrion | 47.45 | 82.28 |
TraesCS2B01G041300.1 | Wheat | cytosol | 73.24 | 77.98 |
TraesCS4B01G357100.1 | Wheat | mitochondrion | 62.29 | 77.81 |
EES15184 | Sorghum | cytosol | 66.91 | 67.07 |
Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 49.39 | 64.04 |
Os05t0212900-00 | Rice | cytosol | 60.58 | 63.52 |
Os10t0158400-00 | Rice | cytosol | 60.83 | 62.81 |
Os10t0167900-00 | Rice | cytosol | 60.1 | 61.9 |
Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 38.93 | 60.38 |
Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 61.8 | 59.48 |
Os10t0162856-00 | Rice | cytosol | 61.07 | 57.97 |
Os05t0212600-00 | Rice | cytosol | 42.34 | 57.62 |
TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 54.5 | 57.58 |
Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 54.99 | 56.93 |
TraesCS2B01G072600.1 | Wheat | mitochondrion | 51.82 | 53.12 |
TraesCS6B01G327900.1 | Wheat | cytosol | 42.58 | 52.4 |
TraesCS2B01G006800.1 | Wheat | cytosol | 46.72 | 51.61 |
TraesCS2B01G019200.1 | Wheat | cytosol | 49.63 | 51.39 |
TraesCS2B01G006000.1 | Wheat | cytosol | 49.15 | 51.27 |
TraesCS4B01G021600.1 | Wheat | cytosol | 49.88 | 51.12 |
TraesCS2B01G006700.1 | Wheat | cytosol | 48.91 | 51.02 |
TraesCS5B01G487700.1 | Wheat | cytosol | 49.15 | 51.01 |
TraesCS2B01G007000.1 | Wheat | cytosol | 49.39 | 50.75 |
TraesCS6B01G245200.1 | Wheat | mitochondrion | 38.69 | 47.32 |
TraesCS2B01G048400.1 | Wheat | cytosol | 44.28 | 46.19 |
TraesCS2B01G038700.1 | Wheat | cytosol | 44.04 | 45.94 |
TraesCS2B01G558400.1 | Wheat | cytosol | 44.28 | 45.73 |
TraesCS1B01G040500.1 | Wheat | cytosol | 44.28 | 45.61 |
TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 43.8 | 45.57 |
TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 43.8 | 45.57 |
TraesCS2B01G613100.1 | Wheat | cytosol | 44.04 | 45.36 |
TraesCS1B01G041000.1 | Wheat | cytosol | 43.31 | 45.06 |
TraesCS1B01G040100.1 | Wheat | cytosol | 43.31 | 45.06 |
TraesCS2B01G038600.1 | Wheat | cytosol | 39.66 | 45.03 |
TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 43.8 | 44.78 |
TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 49.39 | 43.94 |
TraesCS7B01G462200.1 | Wheat | cytosol | 31.14 | 42.81 |
TraesCS7B01G371700.1 | Wheat | plastid | 44.04 | 41.23 |
TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 37.96 | 40.1 |
TraesCS1B01G176300.1 | Wheat | cytosol | 37.23 | 39.23 |
TraesCS5B01G003100.1 | Wheat | cytosol | 36.74 | 36.04 |
VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.68 | 0.58 |
Protein Annotations
Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF23 | InterPro:Polyketide_synthase_type-III |
SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6B01G022500 | EnsemblPlants:TraesCS6B01G022500.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:14126100..14127812
Molecular Weight (calculated)
43632.2 Da
IEP (calculated)
6.458
GRAVY (calculated)
-0.071
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIGTANGN GNGIGHGSAP VAAGRQHAEG PAAMLGIGTA NPTGVEVPQN VFAENLFRVT KSDHLTELQQ KLTRICEKTG IDKRHFHLTE ETLVAHPELY
101: DHDAQSLDNR LAMTVDAVPK LAQCAAAKAI AEWGRPASEI THLVFSTYSA WGAPSADLRL ATLLGLRPTV SRTILSLHGC YGGGRALGLA RELAENNRGA
201: RVLVACAEIT LVCFGGPDGG NLVGHALFGD GAGAVIVGAG PFRDGEQSPI FEMVHATQTT VPKTEHALGM QVSGSGVDFH LAIQVPTLIG QNVERCLLHA
301: FRGGDDDDND DGGAHLPSPL SGNGKWNDLF WAVHPGGRPI LDNIDMVLKL EPEKLAASRH VLREYGNMSG ATIVFVLDEL RRRRSLLPEW GAMLAFGPGV
401: TIETMVLRCP R
101: DHDAQSLDNR LAMTVDAVPK LAQCAAAKAI AEWGRPASEI THLVFSTYSA WGAPSADLRL ATLLGLRPTV SRTILSLHGC YGGGRALGLA RELAENNRGA
201: RVLVACAEIT LVCFGGPDGG NLVGHALFGD GAGAVIVGAG PFRDGEQSPI FEMVHATQTT VPKTEHALGM QVSGSGVDFH LAIQVPTLIG QNVERCLLHA
301: FRGGDDDDND DGGAHLPSPL SGNGKWNDLF WAVHPGGRPI LDNIDMVLKL EPEKLAASRH VLREYGNMSG ATIVFVLDEL RRRRSLLPEW GAMLAFGPGV
401: TIETMVLRCP R
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.