Factsheet for Os10t0167900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0158400-00	Rice	cytosol	84.96	85.18
Os05t0212900-00	Rice	cytosol	79.2	80.61
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	63.41	79.81
Os10t0162856-00	Rice	cytosol	85.96	79.21
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	51.88	78.11
Os05t0212600-00	Rice	cytosol	58.9	77.81
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	80.2	74.94
TraesCS2B01G041300.1	Wheat	cytosol	65.16	67.36
TraesCS2D01G030600.1	Wheat	mitochondrion	63.66	65.8
TraesCS4B01G357800.1	Wheat	cytosol	49.12	65.77
EES15184	Sorghum	cytosol	66.42	64.63
TraesCS4B01G357600.1	Wheat	mitochondrion	39.1	64.46
TraesCS4B01G357700.1	Wheat	mitochondrion	37.84	63.71
TraesCS4D01G351300.1	Wheat	mitochondrion	62.66	62.81
TraesCS6A01G015300.1	Wheat	cytosol	63.41	62.78
TraesCS4B01G357100.1	Wheat	mitochondrion	51.38	62.31
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	61.65	61.65
TraesCS6B01G022300.1	Wheat	cytosol	61.65	61.19
TraesCS6A01G015500.1	Wheat	cytosol, plastid	61.65	60.29
TraesCS6B01G022500.1	Wheat	cytosol	61.9	60.1
HORVU6Hr1G003020.2	Barley	cytosol	61.9	59.81
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	56.89	57.18
Os07t0501100-01	Rice	cytosol	57.64	56.79
TraesCS6D01G018500.1	Wheat	plastid	61.65	56.16
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	10.53	55.26
Os07t0525900-00	Rice	cytosol	52.88	53.02
Os07t0526400-01	Rice	cytosol	52.88	52.88
Os07t0271500-01	Rice	cytosol	52.13	51.74
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	49.87	50.0
Os11t0529800-00	Rice	cytosol, extracellular	49.87	49.63
Os07t0525500-00	Rice	plastid	48.12	49.1
Os11t0529500-00	Rice	cytosol	50.63	48.91
Os07t0214900-00	Rice	cytosol	47.37	46.9
Os01t0602600-00	Rice	cytosol	34.34	41.02
Os11t0566800-01	Rice	cytosol	40.1	40.1
Os04t0103900-01	Rice	cytosol	38.85	39.44
Os10t0484800-01	Rice	cytosol	38.1	39.07
Os07t0411300-00	Rice	cytosol	39.1	38.52
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.51	0.74

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4348180	MapMan:50.2.3	ProteinID:AAN04188.1	ProteinID:AAP52307.1	ProteinID:BAT10048.1
InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	ProteinID:EAZ15421.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
EnsemblPlantsGene:Os10g0167900	EnsemblPlants:Os10t0167900-00	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877
PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III	UniProt:Q8LM05	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00000A5DEC
RefSeq:XP_015613542.1	SEG:seg	:	:	:	:

Description

POLYKETIDE SYNTHASE 18Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0167900-00)

Coordinates

chr10:+:4680861..4682894

Molecular Weight (calculated)

43220.9 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.126

Length

399 amino acids

Sequence
(BLAST)

001: MPGAATTAAV VDSRRSAQRA EGPATIIAIG TANPANIVPQ DNFADYYFGL TKSEHLTELK DKMKRICKKS GIEKRYIHLD EEIIRAHPEI IDKHQPSLEA
101: RVEIAAAEVP KLAESAARKA IAKWGRPATD ITHLIFSTYS GCRAPSADLQ LASLLGLRPS VSRTILSLHG CSGGGRALQL AKELAENNRG ARVLVALSEL
201: TLVCFSTPDE SKIVGHGLFG DGAGAIIVGA GPFSDGECPL FEMVAASQTM IPGTEHALGM QATSTGIDFH LSVQVPMLIK DNIQQSLLES FQSVGYTDPD
301: WNNLFWAVHP GGRAILDNIE GKLQLQPWKL AASRQVLREF GNMSGATIAF VLDELCHRRE KDEDESQQHE WGVMLAFGPG ITIETIVMRN PLARGLKQN

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.