Factsheet for Os04t0103900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.7	60.53
Os01t0602600-00	Rice	cytosol	50.13	58.98
Os11t0566800-01	Rice	cytosol	59.54	58.65
Os07t0214900-00	Rice	cytosol	48.85	47.64
Os11t0530600-01	Rice	cytosol, mitochondrion, plasma membrane	47.84	47.24
Os11t0529800-00	Rice	cytosol, extracellular	42.75	41.9
Os07t0271500-01	Rice	cytosol	41.73	40.8
Os07t0526400-01	Rice	cytosol	40.46	39.85
Os07t0525900-00	Rice	cytosol	39.95	39.45
Os07t0501100-01	Rice	cytosol	40.46	39.26
Os10t0158400-00	Rice	cytosol	39.44	38.94
Os10t0167900-00	Rice	cytosol	39.44	38.85
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	25.95	38.49
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	31.04	38.49
Os05t0212900-00	Rice	cytosol	38.17	38.27
Os11t0529500-00	Rice	cytosol	40.2	38.26
Os07t0525500-00	Rice	plastid	35.88	36.06
Os10t0162856-00	Rice	cytosol	39.69	36.03
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	38.17	35.13
Os05t0212600-00	Rice	cytosol	26.97	35.1
Os10t0484800-01	Rice	cytosol	34.1	34.45
Os07t0411300-00	Rice	cytosol	35.11	34.07

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4334901	MapMan:50.2.3	EMBL:AK100989	ProteinID:BAF13917.1	ProteinID:BAS87522.1
ProteinID:CAE04488.2	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
EnsemblPlantsGene:Os04g0103900	EnsemblPlants:Os04t0103900-01	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877
PANTHER:PTHR11877:SF33	InterPro:Polyketide_synthase_type-III	UniProt:Q7XMR1	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000021C810
RefSeq:XP_015635142.1	RefSeq:XP_015635143.1	SEG:seg	:	:	:

Description

Chalcone synthase, polyketide synthase 2Similar to Chalcone synthase. (Os04t0103900-01)

Coordinates

chr4:-:258818..263006

Molecular Weight (calculated)

42713.8 Da

IEP (calculated)

5.615

GRAVY (calculated)

0.059

Length

393 amino acids

Sequence
(BLAST)

001: MGSQEYIKQG GQQLVAAILG IGTAVPPYVL PQSSFPDYYF DISNSNHLLD LKAKFADICE KTMIDKRHVH MSDEFLRSNP SVAAYNSPSI NVRQNLTDVT
101: VPQLGAAAAR LAIADWGRPA CEITHLVMCT TVSGCMPGAD FEVVKLLGLP LTTKRCMMYH IGCHGGGTAL RLAKDLAENN PGGRVLVVCS EVVSMVFRGP
201: CESHMGNLVG QALFGDAAGA VVVGADPVEA NSERTLFEMV SAWQDIIPET EEMVVAKLRE EGLVYNLHRD VAARVAASME SLVKKAMVEK DWNEEVFWLV
301: HPGGRDILDR VVLTLGLRDD KVAVCREVMR QHGNTLSSCV IMAMEEMRRR SAERGLSTAG EGLEWGLLFG FGPGLTVETI LLRAPPCNQA QAV

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.